DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dh31-R and ghrhr2

DIOPT Version :9

Sequence 1:NP_001260951.1 Gene:Dh31-R / 36475 FlyBaseID:FBgn0052843 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_001106975.1 Gene:ghrhr2 / 100002189 ZFINID:ZDB-GENE-121214-194 Length:411 Species:Danio rerio


Alignment Length:399 Identity:117/399 - (29%)
Similarity:186/399 - (46%) Gaps:56/399 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LNASGQLAGSGGPGAEAGTHCAGTFDGWLCWPDTAVGTSAYELCPDFITGFDPARYAHKECGLDG 112
            ||.:|..||           |...:||..|||..:||......||       |...:|       
Zfish    46 LNINGTNAG-----------CLVEWDGVNCWPAVSVGERVSVSCP-------PLLKSH------- 85

  Fly   113 EWFKHPLTNKTWSN-----YTTCV---NLEDLNWRH------TVNLISEVGYGTSLLAILLSLAI 163
            |......|:|.|||     |..|.   :.|:....|      .|.||..||||.||.::.:::.|
Zfish    86 ELISRTCTSKGWSNMSVPYYIACFQDNSTEEEEIGHISEYFARVKLIYTVGYGMSLSSLCIAVFI 150

  Fly   164 LGYFKSLKCARITLHMNLFASFAANNSLWLVWYLLVMPNSELLH--QSPMRCVALHITLHYFLLS 226
            ...|:.|.|.||.:|:|||::|........|...::..:..:.|  .|.:.|.|......|.:||
Zfish   151 FCIFRKLLCTRIYIHLNLFSTFILRALAVFVKDAVLFADETVNHCTVSTVLCKASVTFFQYCVLS 215

  Fly   227 NYSWMLCEGFYLHTVLVAAFISEKRLVKWLIAF-GWGSPAIVIFVYSMARGLGGTPEDNRHCWMN 290
            |:.|:|.||.||.|:|...| :.||...|.... |||:|::.:.:::..:    ...|:..||.:
Zfish   216 NFYWLLVEGLYLQTLLTFTF-AHKRTFFWCYTLVGWGTPSVTVTIWTFLK----YSYDDYGCWDD 275

  Fly   291 -QTNYQNILMVPVCISMFLNLLFLCNIVRVVLLKLNAPASIQGSCGPSRTVLQAFRATLLLVPLL 354
             .:.:..|:.:|:.:|:.:|.|...||.|::::|...|.|   :.|..|...:..::||||:||.
Zfish   276 LDSGFWWIIKIPILLSVLVNFLMFINISRIIIVKTKTPDS---NGGDKRFYRRLAKSTLLLIPLF 337

  Fly   355 GLQYILTPFRPAPKHPWENTYEIISAFTASFQGLCVAILFCFCNGEVIAQMKRKWRMMCFSNRPR 419
            |:.||:  |...|:|..............||||..||:|:||.|.||..:::::  :..:.:|..
Zfish   338 GVHYIV--FALFPEHVGLEARLFFELVLGSFQGFIVALLYCFLNSEVQNEIRKE--IEKYKSRTD 398

  Fly   420 TNSY-TATQ 427
            .|:: .|||
Zfish   399 INTFHMATQ 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dh31-RNP_001260951.1 HRM 65..132 CDD:280888 20/74 (27%)
7tm_4 140..390 CDD:304433 78/259 (30%)
ghrhr2NP_001106975.1 HRM 54..111 CDD:280888 21/81 (26%)
7tm_2 128..371 CDD:278432 77/252 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.