DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and PDLIM7

DIOPT Version :9

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_005442.2 Gene:PDLIM7 / 9260 HGNCID:22958 Length:457 Species:Homo sapiens


Alignment Length:363 Identity:79/363 - (21%)
Similarity:123/363 - (33%) Gaps:122/363 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VDSDAYATKDDSRWGFLITGGAEFHMPLTVFQVTPNGLADKAGIRLGDIILEINEEDASQLTLSQ 102
            :||.....:..:.|||.:.||.:|::||::.::||.|.|.:||:.:||.:|.|:.|:|..||..:
Human     1 MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIE 65

  Fly   103 AHEKINSTPKKIHFLLRNMEEDDPMGQFEAGEEKSIVMRVPKPLPPPSGRIRASSIEMRLLEMQR 167
            |..||.:                      .||..|:            |..||..::.:   .|:
Human    66 AQNKIRA----------------------CGERLSL------------GLSRAQPVQSK---PQK 93

  Fly   168 KLSAIAEIPKILCSTLA-TVSQNFGRMSESEVDEDDVGEEEAYVQRKFSYDEDALDFELRNGEQA 231
            ..:..|:.|:.   |.| :||.|                   ...|.|.....|.....:||:..
Human    94 ASAPAADPPRY---TFAPSVSLN-------------------KTARPFGAPPPADSAPQQNGQPL 136

  Fly   232 GD--TDSDEEDLVLVREEDAEDVDVPKGAKQSKLLKDVTPESDYASEANYPANEASDDTESDDED 294
            ..  .|:.::.|:    |:.||.....|..||:..:.:         |:....|...|  .|:|.
Human   137 RPLVPDASKQRLM----ENTEDWRPRPGTGQSRSFRIL---------AHLTGTEFMQD--PDEEH 186

  Fly   295 EPGSTVYFMKLPAAAAEDTYSSTEDEDDSDFLNTTYTWNLRNVPKLRINDAEAEGELTLGHQARE 359
            ...|:    ::|...|....|||..|          .|.....|.                    
Human   187 LKKSS----QVPRTEAPAPASSTPQE----------PWPGPTAPS-------------------- 217

  Fly   360 VPQQEQPQEKQPCLEPE--PPKV--------RPATPTP 387
             |....|....|.....  |.|.        :||||||
Human   218 -PTSRPPWAVDPAFAERYAPDKTSTVLTRHSQPATPTP 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 25/73 (34%)
PDLIM7NP_005442.2 PDZ_signaling 5..79 CDD:238492 27/95 (28%)
Atrophin-1 <81..254 CDD:331285 46/247 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 82..142 15/84 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 176..226 15/86 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 239..258 6/16 (38%)
LIM1_Enigma 282..333 CDD:188836
LIM2_Enigma 341..392 CDD:188840
LIM3_Enigma 400..454 CDD:188842
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10683
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24214
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.100

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