DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and PDLIM4

DIOPT Version :10

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:XP_047273804.1 Gene:PDLIM4 / 8572 HGNCID:16501 Length:438 Species:Homo sapiens


Alignment Length:59 Identity:22/59 - (37%)
Similarity:31/59 - (52%) Gaps:0/59 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SRWGFLITGGAEFHMPLTVFQVTPNGLADKAGIRLGDIILEINEEDASQLTLSQAHEKI 107
            |.|||.:.||.:|..|||:.:|.....|..|.:..||:|..||.|....:|..:|..:|
Human    11 SPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRI 69

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_ZASP52-like 41..120 CDD:467281 22/59 (37%)
PDLIM4XP_047273804.1 PDZ_PDLIM-like 4..82 CDD:467235 22/59 (37%)
PHA03247 <79..355 CDD:223021
DUF4749 148..225 CDD:464948
LIM_RIL 363..415 CDD:188835
Blue background indicates that the domain is not in the aligned region.

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