DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and Pard3b

DIOPT Version :9

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:XP_006496361.1 Gene:Pard3b / 72823 MGIID:1919301 Length:1238 Species:Mus musculus


Alignment Length:376 Identity:85/376 - (22%)
Similarity:137/376 - (36%) Gaps:84/376 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PESKSKAPIIKVSCGIGDTDGYPAFDVDSDAYATKDDSRWGF-LITGGAEFHMPLTVF--QVTPN 73
            |.|.|.:|::    |.|.........:|    ..|.....|| ::|..:..|.|..:|  .:.|.
Mouse   397 PSSPSLSPLM----GFGSKKNAKKIKID----LKKGPEGLGFTVVTRDSSIHGPGPIFVKNILPK 453

  Fly    74 GLADKAG-IRLGDIILEINEEDASQLTLSQAHEKINSTPKKIHFLLRNMEEDDPMGQFEAGEEKS 137
            |.|.|.| ::.||.|||:|..|.:           ..|.:::..:||:.::.:.:....|.:|.|
Mouse   454 GAAVKDGRLQSGDRILEVNGRDVT-----------GRTQEELVAMLRSTKQGETVSLVIARQEGS 507

  Fly   138 IVMRVPKPLPPPSGRIRASSIEMRLLEMQRKLSAIAEIPKILCSTLATVSQNFGRMSESEVDEDD 202
            .:.|..|. .|....:...|.|...||:....|..|.:...|            :.::|.....|
Mouse   508 FLPRELKG-EPDCYALSLESSEQLTLEIPLNDSGSAGLGVSL------------KGNKSRETGTD 559

  Fly   203 VGEEEAYVQRKFSYDEDALDFELRNGEQA----GDT---DSDEEDLVLVREEDAEDVDVPKGAKQ 260
            :|   .:::..........|..||..:|.    |:|   .|:.|.:..:|...:.:.:: :|..|
Mouse   560 LG---IFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNI-RGMIQ 620

  Fly   261 SKLLKDVTPESDYASEANYPANEASDDTESDDEDEPGSTVYFMKLPAAAAEDTYSSTEDEDDSDF 325
            ..:|:  .||.        |..|.|   |......||    |.....|.      ||...:||..
Mouse   621 LVILR--RPER--------PLEELS---ECGALSRPG----FENCQEAL------STSRRNDSSI 662

  Fly   326 LNTTYTWNLRNVPK--LRINDAEAEGELTLGHQAREVPQQEQPQEKQPCLE 374
            |....|::.::..|  |..:|..||         .|||....|   .|.||
Mouse   663 LYPFGTYSPQDKRKDLLLPSDGWAE---------NEVPPSPPP---HPALE 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 20/77 (26%)
Pard3bXP_006496361.1 DUF3534 2..74 CDD:338230
PDZ_signaling 236..323 CDD:238492
PDZ 415..504 CDD:214570 24/103 (23%)
PDZ_signaling 536..624 CDD:238492 17/103 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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