DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and Pdlim7

DIOPT Version :10

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001107560.1 Gene:Pdlim7 / 67399 MGIID:1914649 Length:457 Species:Mus musculus


Alignment Length:421 Identity:87/421 - (20%)
Similarity:143/421 - (33%) Gaps:167/421 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VDSDAYATKDDSRWGFLITGGAEFHMPLTVFQVTPNGLADKAGIRLGDIILEINEEDASQLTLSQ 102
            :||.....:..:.|||.:.||.:|::||::.::||.|.|.:||:.:||.:|.|:.|:|..||..:
Mouse     1 MDSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAGVAVGDWVLNIDGENAGSLTHIE 65

  Fly   103 AHEKINSTPKKIHFLLRNMEEDDPMGQFEAGEEKSIVMRVPKPLPPPSGRIRASSIEMRLLEMQR 167
            |..||.:                      .||..|:            |..||..::.:   .|:
Mouse    66 AQNKIRA----------------------CGERLSL------------GLSRAQPVQSK---PQK 93

  Fly   168 KLSAIAEIPKILCSTLATVSQN---FGRMSESEVDEDDVGEEEAYVQRKFSYDEDALDFELR-NG 228
            .|:..|:.|:...:..|::::.   ||....:                         |..|| ||
Mouse    94 ALTPPADPPRYTFAPSASLNKTARPFGAPPPT-------------------------DSTLRQNG 133

  Fly   229 EQAGDTDSDEEDLVLVREEDAEDVDVPKGAKQSKLLKDVTPESDYASEANYPANEASDDTESDDE 293
            :             |:|:      .||..:||..:                      :||| |..
Mouse   134 Q-------------LLRQ------PVPDASKQRLM----------------------EDTE-DWR 156

  Fly   294 DEPGS--TVYFMKLPAAAAEDTYSSTEDEDDSDFLNTTYTWNLRNVPKLRINDAEAEGELTLGHQ 356
            ..||:  :..|..|    |..|.:....:.|.:|:..:     ..||:   .:|.|         
Mouse   157 PRPGTGQSRSFRIL----AHLTGTEFMQDPDEEFMKKS-----SQVPR---TEAPA--------- 200

  Fly   357 AREVPQQEQPQEKQPCLEPEPPKVRPATPTPKAPP---------QESAEGQTQKLLFRLDKLERS 412
                |....|||..|         .|.||:|.:.|         :..|..:|..:|.|..:....
Mouse   201 ----PASTIPQESWP---------GPTTPSPTSRPPWAVDPAFAERYAPDKTSTVLTRHSQPATP 252

  Fly   413 WPWADREKIIY--------------KQSTCH 429
            .|..:|..|:.              |...||
Mouse   253 TPLQNRTSIVQAAAGGGTGGGSNNGKTPVCH 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_ZASP52-like 41..120 CDD:467281 25/78 (32%)
Pdlim7NP_001107560.1 PDZ_PDLIM-like 5..83 CDD:467235 29/111 (26%)
PHA03247 <81..247 CDD:223021 50/269 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 82..166 26/153 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..226 15/69 (22%)
LIM1_Enigma 282..333 CDD:188836 2/2 (100%)
LIM2_Enigma 341..392 CDD:188840
LIM3_Enigma 400..454 CDD:188842
Blue background indicates that the domain is not in the aligned region.

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