DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42319 and grip2a

DIOPT Version :9

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:XP_017212845.1 Gene:grip2a / 568084 ZFINID:ZDB-GENE-081104-132 Length:1100 Species:Danio rerio


Alignment Length:595 Identity:116/595 - (19%)
Similarity:187/595 - (31%) Gaps:200/595 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ESKSKAPIIKVSCGIGDTDGYPAFDVDSDAYATKDDSRWGF--LITGGA----EFHMPLTVFQVT 71
            |.||...:...:.|.|.    ....::|.....:.|...||  .:.||.    ....|..:..:.
Zfish   473 EHKSSLSLASSTVGAGG----QVVHLESAEVLLRGDPLTGFGLQLQGGVFATEPLSAPAAIRFIE 533

  Fly    72 PNGLADKAGI-RLGDIILEINEEDASQLTLSQAHEKINSTPKKIHFLLRNMEEDDPMG---QFEA 132
            |:..|::.|: ::||.||.||.......||.:|::           |||:....:.:.   :|:.
Zfish   534 PDTPAERCGVLQVGDRILSINGIPTEDGTLEEANQ-----------LLRDAALANKIALEVEFDV 587

  Fly   133 GEEKSIVMRVPKPLPPPSGRIRASSIEMRLLEMQRKLSA---------IAEIPK-ILCSTLATVS 187
            .|  |::        |.||..:....:.|.:|:...:||         |:||.| .:...:.|:.
Zfish   588 AE--SVI--------PSSGTFQVKLPKRRGVELGITISASKKAGKPLIISEIQKGSIAHRIGTLE 642

  Fly   188 QNFGRMSESEVDEDDVGEEEA---------YVQRKFSYDEDALD-----------FEL------- 225
            .....::...|..|:.|.|||         .|:.:...|||.||           .||       
Zfish   643 PGDRLLAIDNVRLDNCGMEEAMMVLQQAEGMVKLRIQKDEDNLDELESSGSVIFTVELKRHGGPL 707

  Fly   226 --------------------RNG----------------------------------EQAGDTDS 236
                                |||                                  :.||||.:
Zfish   708 GITISGTEEPFNPILISSLTRNGLAHRTGALHIGDRVLAINNMSLKGKPLSEAIHLLQTAGDTVT 772

  Fly   237 ----DEEDLVLVRE-----------EDAED--VDVPKGAKQSKLLKDVTP--------------- 269
                ...|.:|..|           .|.||  .|..:..|.|.||:..||               
Zfish   773 LKIKKRSDPLLDSERGSPSRTASCVSDMEDDRSDSFRRGKYSDLLRQTTPPSLDSAMDSWDSSAL 837

  Fly   270 ESDYASEANYPANEASD------DTESDDEDEP--------GSTVYFMKLP----------AAAA 310
            ::.|.|:..| .:..||      |....:...|        ..|||..:|.          :.|.
Zfish   838 DAGYGSQGVY-IHRPSDFTLHPSDWRQTNHRSPLMSRRPAHRPTVYDGRLSEEDWTYSGSVSPAC 901

  Fly   311 EDTYSSTEDEDD---SDFLNTTYTWNLRNVPKLRINDAEAE----GELTLGHQAREVPQQEQPQE 368
            ...|:||.|..:   |..|....|.....:    :.:.||.    ..|:||...     ::|.:.
Zfish   902 GHNYNSTTDAQENYWSQALQDLETCGQSEI----LRELEATIMSGSTLSLGEDF-----EKQNES 957

  Fly   369 KQPCLEPEPPKVRPATPTPKAPPQESAEGQTQKLLFRLDKLERSWPWADREKIIYKQSTCHLV-P 432
            |...||..|......||........|...:..|:..:.|...|.:.::..:.::.|....::: |
Zfish   958 KTKFLELSPENTSVNTPEDLKENSPSVPLELHKICIQKDADSRDFGFSVSDGLLEKGVYVNMIRP 1022

  Fly   433 RKPLGLVGQR 442
            ..|....|.|
Zfish  1023 DGPADQAGLR 1032

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 19/80 (24%)
grip2aXP_017212845.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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