DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42319 and grip1

DIOPT Version :9

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:XP_009298419.1 Gene:grip1 / 558006 ZFINID:ZDB-GENE-041210-125 Length:1191 Species:Danio rerio


Alignment Length:381 Identity:87/381 - (22%)
Similarity:132/381 - (34%) Gaps:107/381 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DTDGYPAFDVDSDAYATKDDSRWGFLITGGAEFHMPLTVFQVTPNGLADKAG-IRLGDIILEINE 92
            :|.|...:.|:...|.    ...|..|:|..|...|:.:..:|..|||::.| |.:||.||.||.
Zfish   705 ETSGAIIYTVELKRYG----GPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINS 765

  Fly    93 EDASQLTLSQAHEKINSTPKKIHFLLRNMEEDDPMGQFEAGEEKSIVMR----VPKPLPPP-SGR 152
            .......||:|          ||.|..            |||..::.::    :|.|.||. :||
Zfish   766 NSLKGKPLSEA----------IHLLQM------------AGESVTLKIKKQGELPSPKPPSVTGR 808

  Fly   153 IRASSIEMRLLEMQRKLSAIAEIPKILCSTLATVSQNFGRMSESEVDEDDVGEEEA--YVQRKFS 215
            :.      .|.:::.......::..|..:|:.:|        :|.|:..|....:|  ..|....
Zfish   809 LN------NLSDLEDDGQKAGKLSDIYSTTIPSV--------DSAVESWDGSAIDATFSTQAPTG 859

  Fly   216 YDEDALDF---ELRN-----GEQAGDTDSDEEDLVLVREED----AEDVDVPKGAKQSKLLKDVT 268
            :......|   |.||     |..:....|.:.:.:|   .|    .:|.|.|..:..|.|...:.
Zfish   860 FQASGYSFHSHEWRNAKPSRGSLSPVNSSRQRNNIL---PDFGIGVDDWDRPSASGASTLPTGLI 921

  Fly   269 PESDYASEANYPANEASDDTESDDEDEPGSTVYFMKLPAAAAEDTYSS------TEDEDDSDFLN 327
            .:|.:        ....|.||.|.|:...|         .|.||..:.      .|.||..|.| 
Zfish   922 SDSRF--------TVGHDGTEPDQEENFWS---------QALEDLETCGQSGILRELEDKPDRL- 968

  Fly   328 TTYTWNLRNV---------PKLRINDAEAEGELTLGHQAREVPQQE----QPQEKQ 370
                .|.||:         ..|.:|...|.   |..|..|:...||    :||..|
Zfish   969 ----LNKRNLAILATIMSGSSLSLNHDPAP---TRSHLGRQASFQERGSNKPQYSQ 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 23/74 (31%)
grip1XP_009298419.1 PDZ_signaling 79..159 CDD:238492
PDZ_signaling 178..261 CDD:238492
PDZ_signaling 276..359 CDD:238492
PDZ_signaling 490..578 CDD:238492
PDZ_signaling 591..675 CDD:238492
PDZ_signaling 711..792 CDD:238492 28/106 (26%)
PDZ_signaling 1053..1133 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.