DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and pdzd3a

DIOPT Version :9

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:XP_685398.3 Gene:pdzd3a / 557269 ZFINID:ZDB-GENE-080430-1 Length:520 Species:Danio rerio


Alignment Length:134 Identity:32/134 - (23%)
Similarity:58/134 - (43%) Gaps:29/134 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PAFDVDSDAYATKDDSR-----------------WGFLIT---GGAEFHMPLTVFQVTPNGLADK 78
            |...:|:.|....||..                 :||.::   |....|:   |.||.|...|::
Zfish    40 PKEGIDNPALVISDDKEPDVHPRLCVLRREEGQGFGFYLSRDAGRCRGHV---VRQVEPWSSAER 101

  Fly    79 AGIRLGDIILEINEEDASQLTLSQAHEKINSTPKKIHFLLRNMEEDDPMGQFEAGEEKSI--VMR 141
            ||:|:||.:||:||:.......|....|:.::..|::.|:.:.::    .:|...|.:.:  |.|
Zfish   102 AGLRIGDHVLEVNEDFVDDKEHSTVVLKVQASGLKLYLLVLSAQD----YEFAVSEGRDLLSVAR 162

  Fly   142 VPKP 145
            ..:|
Zfish   163 SYRP 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 24/93 (26%)
pdzd3aXP_685398.3 PDZ_signaling 61..142 CDD:238492 22/83 (27%)
PDZ_signaling 172..252 CDD:238492
PDZ 280..363 CDD:214570
PDZ 408..490 CDD:214570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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