DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and pdlim5a

DIOPT Version :9

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:XP_017211548.1 Gene:pdlim5a / 436927 ZFINID:ZDB-GENE-040718-401 Length:557 Species:Danio rerio


Alignment Length:368 Identity:80/368 - (21%)
Similarity:125/368 - (33%) Gaps:133/368 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 WGFLITGGAEFHMPLTVFQVTPNGLADKAGIRLGDIILEINEEDASQLTLSQAHEKINSTPKKIH 115
            |||.:.||.:|:|||::.::|..|.|.|||:.:||::|.|:......:...:|..||.::..|::
Zfish    15 WGFRLQGGKDFNMPLSISRLTDAGKAAKAGVAVGDLVLSIDGISTDGMNHLEAQNKIKASSDKLN 79

  Fly   116 FLLRNMEEDDPMGQFEAGEEKSIVMRVPKPLPPPSGRIRASSIEMRLLEMQRKLSAIAEIP---K 177
            ..|:....                  :|||...|..         ..:|:.:.:.....||   .
Zfish    80 LSLQKASS------------------LPKPDVAPKD---------DCVEIIKPVPMTTSIPFSSD 117

  Fly   178 ILCSTLATVSQN-----FGRMSESEV------------------------DEDDVGEEEAYVQRK 213
            |..||..|.|.|     ||......:                        ..|.....:..|.|.
Zfish   118 ITNSTHITSSSNRSARPFGGAGSPPIAFIPSTASAFAPASTAQYPNPLSPPTDGSPNHQPTVPRP 182

  Fly   214 FSY--------DEDALDFELRNGEQAGDTDSDEEDLVL-------------VREEDAEDVDVP-- 255
            ..|        ||:|.  |:..|::.|..:|..|...|             :.|.|.|...||  
Zfish   183 SVYNTPINLYSDENAC--EVAMGQRRGLLESQGESCQLNGKPAMNRLPRVPITETDIEFYHVPTH 245

  Fly   256 ------------------KGAKQS---KLLKDVT---PESDYASEANYPANEASDDTESDDEDE- 295
                              .|..||   ::|..:|   .|.|.|.||     ||:..|.::|.|: 
Zfish   246 GDASRKRIMEDTEDWRPRTGTSQSRSFRILAQITGTESELDRAQEA-----EAAKKTTNEDVDDC 305

  Fly   296 --------PGSTVYFMKLPAAAAEDTYSSTEDEDDSDFLNTTY 330
                    |..|:  :|.||         |...:.:.|:..|:
Zfish   306 QPSAHITCPVKTM--IKAPA---------TPVRNSAGFITPTF 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 23/67 (34%)
pdlim5aXP_017211548.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24214
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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