DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42319 and bbg

DIOPT Version :9

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001246755.1 Gene:bbg / 39583 FlyBaseID:FBgn0087007 Length:2637 Species:Drosophila melanogaster


Alignment Length:465 Identity:99/465 - (21%)
Similarity:154/465 - (33%) Gaps:146/465 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SDAYATKDDSRWGFLITGGAEFHMPLTVFQVTPNGLADKAGIRLGDIILEINEEDASQLTLSQAH 104
            :|:.|:|..:.||                           .:|.||.|:.|:..|..:||.....
  Fly   126 ADSPASKVSTSWG---------------------------NLREGDEIVSIDGRDVRELTRIDCV 163

  Fly   105 EKINSTPKKIHFLLRN------MEEDDPMGQFEAGEEKSIVMRVPKPLPPP------SGRIRASS 157
            ..:... ..|..::||      ..|:||..|    |..||.:....|.|||      ..|..:..
  Fly   164 RGLKDN-VAIKLVVRNGHGQKPPSEEDPQQQ----EHLSITLNAQPPPPPPVPPRKLVRRQNSKE 223

  Fly   158 IEMRLL---------EMQRKLSAIAEIPKI------LCSTLATVSQNFGRMSESEVDEDDVGEEE 207
            .:.:||         :.:..|:.:.|..|.      ..||::||...|...|....|....|.|.
  Fly   224 NQAQLLIEKPLTPPPDAEYYLNLLTESIKAGSESDDTASTISTVIDKFSVGSNYSSDSSLNGHEL 288

  Fly   208 AYVQRKFSYDE----------------------DALDF-----------ELRNGEQAGDTDSDEE 239
            |.|.:.|:..|                      :.::|           |||:.|.. .|.....
  Fly   289 AKVLQPFTLLEQEFLPLEQPLGHPKLLIPGNNYENVEFKTEKVNVYENVELRSPETT-PTPKPRV 352

  Fly   240 DLVLVREEDAEDVDVP-KGAKQSKLLKDVTPESDYASEANYPANEASDDTESDDEDEPGSTVYFM 303
            .|..|..:....:.:| |....:||..:|||       ...|..|......::..|.|.:....:
  Fly   353 QLATVEPKKRSIIPMPRKIPTPTKLPIEVTP-------PRVPILEEPKTPTNNKVDSPKTPTNEL 410

  Fly   304 KLPAAAAEDTYSSTEDEDDSDFLNTTYTWNLRNVPKLRINDAEAEGELTLGHQAREVPQQEQPQE 368
            |      |...|:|:                  :||.:.:.|:.|||:.|...|   |:|:.||.
  Fly   411 K------ESPISATK------------------IPKAKFSRAKTEGEIKLHLPA---PKQQSPQS 448

  Fly   369 KQ-------PCLEPEPPKVRPATPTPKAPPQESAEGQTQKLLFRLDKLERSWPWADREKIIYKQS 426
            |.       |..:...||  |.:||....|..|.       :.||  |::.....|.:..:|:..
  Fly   449 KSRIPIVSTPTAQKTVPK--PVSPTMNGTPLSSN-------IPRL--LQKQKSETDLKLNLYRSK 502

  Fly   427 TCHLVPRKPL 436
            :....||.||
  Fly   503 SKESSPRPPL 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 12/73 (16%)
bbgNP_001246755.1 PDZ_signaling 90..177 CDD:238492 14/78 (18%)
ATP-synt_B <1084..>1109 CDD:304375
PDZ_signaling 2331..2413 CDD:238492
PDZ_signaling 2553..2634 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.