DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and ldb3

DIOPT Version :10

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:XP_017950805.1 Gene:ldb3 / 394699 XenbaseID:XB-GENE-922381 Length:818 Species:Xenopus tropicalis


Alignment Length:551 Identity:108/551 - (19%)
Similarity:170/551 - (30%) Gaps:213/551 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 WGFLITGGAEFHMPLTVFQVTPNGLADKAGIRLGDIILEINEEDASQLTLSQAHEKINS------ 109
            |||.:.||.:|:||||:.:|||...|.::.:..||:::.|:..:...:|..:|..||.|      
 Frog    13 WGFRLQGGKDFNMPLTISRVTPGSKAAQSSVNQGDLVVAIDGVNTDGMTHLEAQNKIKSASYNLG 77

  Fly   110 ---------------TPK-----------KIHF--------------------LLRNMEEDDPMG 128
                           ||:           |.|.                    |:.:|..::.|.
 Frog    78 LTLQKSKRPGPVPTATPRMDSPMPVIPHQKDHALEINGSRTAYSTVSSKSAVPLVGSMSTNETMA 142

  Fly   129 QFEAGEEKS--------------------------------------IVMRVPKPL---PPPSGR 152
            .:.:.:|.:                                      :|.....|:   .|...|
 Frog   143 GYVSKQETNHSHSSTFIKTSVRTSMSTHSVASDASPIKGSIGSKVDPLVSGANNPINQFSPSKNR 207

  Fly   153 IRASSIEMRLLEMQRKLSAIAEIPKILCSTLAT-------------------------VSQNFGR 192
            :..:.:.:...|   .|:.:||:.|:.....|:                         |.:|.|:
 Frog   208 LYNNPVGLYSAE---TLNEMAEMHKLSLKGRASEGGLHRGNLPVKDPLVDIASPVYQAVLKNQGK 269

  Fly   193 MSESEVDEDDVGEEEAYVQRKFSYDEDALDFELRNGEQAGDTDSDEEDLVLVREEDAEDVDV-PK 256
             :|||:  ||.....|.:|.| |:...|   .:...|...|.|.|.......:|..|:..:: |.
 Frog   270 -TESEI--DDWARRAANLQSK-SFRVLA---HITGTEYMQDPDEDALRRASSKENVAKSPEISPA 327

  Fly   257 GAK-------------QSKLLKDVTPESDYASEANYPANEASDDT------ESDDED----EPGS 298
            |||             :|...:|:..:....|...|......|..      .|.|::    .|..
 Frog   328 GAKVLPSARSGTWHPTKSPTREDIPSQPSPVSSRGYSVRFGGDSVPRKNVHTSTDQNLPKLSPPI 392

  Fly   299 TVYFMKLPAAA-----------------AEDTYSS-----TEDEDDSDFLNTTY----------- 330
            |..:.:.||||                 |..|.||     :..:..|.| .|||           
 Frog   393 TSTYKRAPAAASISASQKTFQGSKNMSIAASTISSAISAQSSHQQQSSF-TTTYQSKASQSFSSS 456

  Fly   331 TWNLRNVPKLRINDAEAEGELTLGHQAR-----EVPQ--QEQPQEKQPC-----LEPEPPKVRPA 383
            |.....||....::..|:|.:..|..:.     .||.  ..:|..|.|.     .||..... ||
 Frog   457 TTAKGPVPYGAYSEPAAKGPVPYGGYSEPAAKGPVPYGGYSEPAAKGPVPYGGYSEPAASSA-PA 520

  Fly   384 TPTPK--------------APPQESAEGQTQ 400
            .|.||              .|.|..|.|..|
 Frog   521 APAPKPRVVTTASIKPSVYQPSQAPAPGPVQ 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_ZASP52-like 41..120 CDD:467281 27/120 (23%)
ldb3XP_017950805.1 PDZ_PDLIM-like 4..82 CDD:467235 22/68 (32%)
DUF4749 209..311 CDD:464948 23/111 (21%)
MISS <462..625 CDD:318115 22/91 (24%)
LIM1_ZASP_Cypher 642..693 CDD:188838
LIM2_Enigma_like 701..752 CDD:188748
LIM3_Enigma_like 760..813 CDD:188749
Blue background indicates that the domain is not in the aligned region.

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