Protein Alignment CG42319 and pdlim1

DIOPT Version :10

• Sequence 1: NP_001137648.1
• Gene: CG42319 / 36473
• FlyBaseID: FBgn0259219
• Length: 452
• Species: Drosophila melanogaster
• Sequence 2: XP_017950803.1
• Gene: pdlim1 / 394527
• XenbaseID: XB-GENE-1004691
• Length: 345
• Species: Xenopus tropicalis
• Alignment Length: 307
• Identity: 60/307 - (19%)
• Similarity: 99/307 - (32%)
• Gaps: 110/307 - (35%)

  Fly    51 WGFLITGGAEFHMPLTVFQVTPNGLADKAGIRLGDIILEINEEDASQLTLSQAHEKINSTPKKIH 115
            |||.:.||.:|..|||:.:|.|...|..|.:.:||:::.|:.|:...:|..:|..||.....::.
 Frog    14 WGFRLIGGKDFDQPLTISRVMPGSKAAVADLCIGDVVISIDGENTDGMTHLEAQNKIKGCEDELI 78

  Fly   116 FLLRNMEEDDPMGQFEAGEEKSIVMRVPKPLPPPSGR-------IRASSIEMRLLEMQRKLSAI- 172
            ..:..:|.                 ::..||....|:       :.::..|::.:......||:
 Frog    79 LTINRVES-----------------KIWSPLVSEDGKPNPYKMNLASNPQELKQIGSAHNRSAMP 126

  Fly   173 ------AEIPKILCSTLATVSQNFGRMSESEVDEDDVGEEEAYVQRKFSYDEDALDFELRNGEQA 231
                  :..||::.:                          .|......|..|    .:.|...|
 Frog   127 FTAASASSTPKVITA--------------------------QYNNPAGLYSSD----NIENFNSA 161

  Fly   232 GDTDSDEEDLVLVREEDAEDVDVPKGAKQSKLLKDVTPESDYASEANYPANEASDDTESD----- 291
            .:|.|                 .|.....||           |||...|||....|.||:
 Frog   162 LETKS-----------------TPSAQVPSK-----------ASEPTQPANTRHLDKESEVYKML 198

  Fly   292 ----DEDE-PGSTVYFMKLPAAAAEDTYSSTEDEDDSDFLNT--TYT 331
                :.|| |..:..|:.|         ....:.|:.||..|  .||
 Frog   199 QENQELDEPPRQSASFLVL---------QEILETDEKDFEGTECLYT 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42319	NP_001137648.1	PDZ_ZASP52-like	41..120	CDD:467281	21/68 (31%)
pdlim1	XP_017950803.1	PDZ_PDLIM-like	5..83	CDD:467235	21/68 (31%)
		DUF4749	137..225	CDD:464948	25/154 (16%)
		LIM_CLP36	276..327	CDD:188832