DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and Fife

DIOPT Version :9

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001261340.1 Gene:Fife / 38337 FlyBaseID:FBgn0264606 Length:1314 Species:Drosophila melanogaster


Alignment Length:558 Identity:96/558 - (17%)
Similarity:183/558 - (32%) Gaps:169/558 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPEQLGLLWSVPESKSKAPIIK----------------------VSCGIGDTDGYPAF------- 36
            |.:..|.|.:||.|....|:..                      :...|.|.|..|..       
  Fly   430 MLQNRGALPAVPPSSIPPPMASFTGPNLEDLEAPRRQTSMDGEAIRIVIHDVDSGPICASKRRII 494

  Fly    37 ---DVDSDAYATKDDSRWGFLITG---GAEFHMPLTVFQVTPNGLADKAGIRLGDIILEINEEDA 95
               |....|:.|:.   :|..:.|   ||:..:...:....|.|.|:|.|::.||.|||.|....
  Fly   495 LRRDPTDKAHRTRG---FGMRVVGGKTGADGRLFAYIVWTVPGGAAEKNGLQQGDKILEWNGMSL 556

  Fly    96 SQLTLSQAHEKINSTPKKIHFLLRNMEE--------------------------DDPMG-----Q 129
            ...:..:....::.|...:..|:.:..:                          |.|:|     :
  Fly   557 IDRSFEEVCSIMDRTGDVVELLVEHATDFRMCDLFDENLPPGNAGGQSGPRRSGDGPVGLGLIAE 621

  Fly   130 FEAGEEKSIVMRVPKPLPPPSGRIRASSIEMRLLEMQRKLSAIAEIPKILCSTLATVSQNFGRMS 194
            .|...:||......:.||....:|....:....:::|  :...||..:::.|.:|          
  Fly   622 PETTTDKSPASPTRRKLPKTPEQIAREKLVTGRVQIQ--VWYHAERSELVVSLMA---------- 674

  Fly   195 ESEVDEDDVGEEEAYVQRKF--SYDEDAL-----DFELRNGEQAGDTDSD-----------EEDL 241
                .:|....:|||.....  :|.:..:     |..::..|.:..|.:.           :.|.
  Fly   675 ----GDDLAPRDEAYGHGNLPEAYAKVRILPKCGDGSVQQTEVSRPTQNPIWNATLTFGHVKADT 735

  Fly   242 VLVREEDAEDVDVPKGAKQSKLLKDVTP--ESDYASEANYPANEASDDTES---DDEDEPG-STV 300
            ::||..|.:             |.|:.|  ||.:..|.:....:|..|.::   ..||..| ..:
  Fly   736 LMVRYIDIQ-------------LWDLVPHTESIFLGECSIELQQAFLDDQAIWCRLEDTKGLRGI 787

  Fly   301 YFMKLPAAAAEDTYSSTEDEDDSD---FLNTTYTWNLRNVPKLRINDAEAEGELTLGHQAREVPQ 362
            ...|.|:.:...:.::.......|   .|...|     |:.:...:|.::.|:.|          
  Fly   788 SISKSPSVSPRGSIAAGAGAPSGDVTRLLRRDY-----NMQRSNSDDVDSIGDGT---------- 837

  Fly   363 QEQPQEKQPCLEPEPPKVRPATPTPKAPPQESAEGQTQKL-LFRLDK-LERSWP------WADRE 419
                    ..|.|:...:..:.       :.|::.:|.:: :::|.| ..||.|      :.|.|
  Fly   838 --------SLLHPDHAWIAGSR-------RGSSQSETMEVEVYQLGKDFSRSLPGSRRSSFQDAE 887

  Fly   420 KIIYKQS------TCHLVPRKPLGLVGQRMQLLLKDKK 451
            |...::.      |.:||.|:...:..:....:||..|
  Fly   888 KNRLEEDAMATPPTSYLVGRRRSSVARRDPDEILKSLK 925

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 18/76 (24%)
FifeNP_001261340.1 FYVE_BSN_PCLO 130..187 CDD:277290
PDZ_signaling 491..580 CDD:238492 20/91 (22%)
DegQ <526..577 CDD:223343 12/50 (24%)
C2A_RIM1alpha 651..779 CDD:175997 25/156 (16%)
C2 1163..1304 CDD:301316
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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