DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and ldb3b

DIOPT Version :10

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:XP_005156328.1 Gene:ldb3b / 334100 ZFINID:ZDB-GENE-030131-6032 Length:308 Species:Danio rerio


Alignment Length:97 Identity:26/97 - (26%)
Similarity:44/97 - (45%) Gaps:8/97 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 WGFLITGGAEFHMPLTVFQVTPNGLADKAGIRLGDIILEINEEDASQLTLSQAHEKINSTPKKIH 115
            |||.:.||.:|:|.||:.::||...|....:..||||..|:......:|..:|..||.:...|:.
Zfish    14 WGFRLQGGKDFNMSLTISRITPGSKAASGNLNQGDIITAIDGVSTEGMTHLEAQNKIKAATTKLS 78

  Fly   116 FLLRNMEEDDPMGQFEAGEEKSIVMRVPKPLP 147
            ..::......|:        .:...|:..|:|
Zfish    79 LTMQRSRRPAPV--------PTATPRMDSPMP 102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_ZASP52-like 41..120 CDD:467281 22/68 (32%)
ldb3bXP_005156328.1 PDZ_PDLIM-like 5..83 CDD:467235 22/68 (32%)
DUF4749 176..275 CDD:464948
Blue background indicates that the domain is not in the aligned region.

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