DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and gopc

DIOPT Version :9

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_956851.1 Gene:gopc / 326887 ZFINID:ZDB-GENE-030131-5086 Length:455 Species:Danio rerio


Alignment Length:135 Identity:34/135 - (25%)
Similarity:60/135 - (44%) Gaps:27/135 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PESKSKAPI------IKVSCGIGDTDGYPAFDVDSDAYATKDDSR-WGFLITGGAEFHMPLTVFQ 69
            |:....:|:      :|.:.|:|     |...|    ..||:|.. .|..||||.|..:|:.:.:
Zfish   261 PKKPLPSPVGHDTDSLKKTQGVG-----PIRKV----VLTKEDHEGLGISITGGKEHGVPILISE 316

  Fly    70 VTPNGLADK-AGIRLGDIILEINE---EDASQ----LTLSQAHEKINSTPKKIHFLLRNMEEDDP 126
            :.|...|:: .|:.:||.||.:|.   .||..    ..|||...:|..   ::.::...::.||.
Zfish   317 IHPTQPAERCGGLHVGDAILAVNNINLRDAKHKEAVTILSQQRGEIEF---EVVYVAPEVDSDDE 378

  Fly   127 MGQFE 131
            ..::|
Zfish   379 NVEYE 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 24/82 (29%)
gopcNP_956851.1 PDZ_signaling 285..367 CDD:238492 25/88 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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