DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and Pdzd7

DIOPT Version :9

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001099832.2 Gene:Pdzd7 / 293996 RGDID:1309882 Length:1031 Species:Rattus norvegicus


Alignment Length:418 Identity:83/418 - (19%)
Similarity:143/418 - (34%) Gaps:127/418 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VDSDAYATKDDS--------------RWGFLITGGAEFHMPLTVFQVTPNGLADKAGIRLGDIIL 88
            ::|...|..|:|              |.||.:.||:|..:.:.|.:|.....|::||:.:||.|.
  Rat    70 INSPIEANSDESDIIHAVCVEKSPSGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAGLCVGDKIT 134

  Fly    89 EINEEDASQLTLSQAHEKINSTPKKIHFLLRNMEEDDPMGQFEAGEEKSIVMRVPKPLPPPSGRI 153
            |:|.......|:..|...:.|: .::|.::|.|.                  |||        .|
  Rat   135 EVNGLSLESTTMGSAVRLLTSS-SRLHMMVRRMG------------------RVP--------GI 172

  Fly   154 RASSIEMRLLEMQRKLSAIAEIPKILCSTLATVSQNFGRMSESEVDEDDVGEEEAYVQRKFSYDE 218
            :.|..:...:::..:...:.:     ||:..:.|.:          ||.|   ...|....:.|:
  Rat   173 KFSKEKTTWVDVVNRRLVVEK-----CSSTPSDSSS----------EDGV---RRIVHLYTTSDD 219

  Fly   219 DALDFELRNGEQAG---------------DTDSDEEDLVL----VREED---AEDVDVPKGAKQS 261
            ..|.|.:|.|::.|               :......|.||    ||.:|   ::.|:|.||....
  Rat   220 FCLGFNIRGGKEFGLGIYVSKVDHGGLAEENGIKVGDQVLAANGVRFDDISHSQAVEVLKGQTHI 284

  Fly   262 KL----------------------------LKDVTPESDYASEANYPANEA---SDDTESDDED- 294
            .|                            |:.::|.|:.:|..:..|:.|   |....||..| 
  Rat   285 MLTIKETGRYPAYKEMVSEYCWLDRLSNGVLQQLSPASESSSSVSSYASSAPCSSGSLPSDRMDV 349

  Fly   295 -----EPGSTVYFMKLPAAAAEDTYSSTEDEDDSDFLNTTYTW-NLRNVPKLRINDAEAEGELTL 353
                 :|.|     :.|.....||...||.:...   :...|| ::|....||.....::|..:.
  Rat   350 CLGPEDPTS-----QGPGWGRADTAMQTEPDMGG---SRVETWCSVRPTVILRDTAIRSDGPSST 406

  Fly   354 GHQAREVPQQEQPQEKQPCLEPEPPKVR 381
            .|....:.:..:.........|.||..|
  Rat   407 RHLDSALSESPKTALLLALSRPRPPITR 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 22/87 (25%)
Pdzd7NP_001099832.2 PDZ_signaling 84..164 CDD:238492 20/80 (25%)
PDZ_signaling 209..289 CDD:238492 18/79 (23%)
HN_PDZD7_like 555..632 CDD:259824
PDZ_signaling 866..954 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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