DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and Cytip

DIOPT Version :9

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_631939.1 Gene:Cytip / 227929 MGIID:2183535 Length:359 Species:Mus musculus


Alignment Length:236 Identity:45/236 - (19%)
Similarity:85/236 - (36%) Gaps:48/236 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 VFQVTPNGLADKAGIRLGDIILEINEEDASQLTLSQAHEKINSTPKKIHFLLRNMEEDDPMGQFE 131
            :.:|..:..|..||:::|||...:|.......|..|..:.|.|:...:.....|........:.|
Mouse   111 ICKVQEDSPAHCAGLQVGDIFANVNGVSTEGFTHKQVVDLIRSSGNLLTIETLNGTMIHRRAELE 175

  Fly   132 AGEEKSIVMRVPKPLPPPSGRIRASSIEMRLLEMQRKL---SAIAEIPKILCSTLATVSQNFGRM 193
            |            .|......::...:|:|.|.:|.:.   ...|..|.:....| ..|..||.:
Mouse   176 A------------KLQTLKQTLKKKWVELRSLHLQEQRLLHGDTANSPNLENMDL-DESSLFGNL 227

  Fly   194 --------------SESE----VDEDDVGEEEAYVQRKFSYDEDALDFELRNGEQAGDTDSDEED 240
                          |||.    :....|..|:.|   :.|..||::     .|..:..|.:|:| 
Mouse   228 LGPSPALLDRHRLSSESSCKSWLSSLTVDSEDGY---RSSMSEDSI-----RGAFSRQTSTDDE- 283

  Fly   241 LVLVREEDAEDVDVPKGAKQSKLLKDVTPESDYAS--EANY 279
              ....:|.:::.....:::::.: .||....::.  |:||
Mouse   284 --CFHSKDGDEILRNASSRRNRSI-SVTSSGSFSPLWESNY 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 12/51 (24%)
CytipNP_631939.1 PDZ_signaling 76..161 CDD:238492 12/49 (24%)
Interaction with CYTH1. /evidence=ECO:0000250 166..188 3/33 (9%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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