DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and LNX2

DIOPT Version :9

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_699202.1 Gene:LNX2 / 222484 HGNCID:20421 Length:690 Species:Homo sapiens


Alignment Length:113 Identity:29/113 - (25%)
Similarity:49/113 - (43%) Gaps:19/113 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 GFLITGG---AEFHMPLTVFQVTPNG-LADKAGIRLGDIILEINEEDASQLTLSQAHEKINSTPK 112
            |..:.||   ....:|:.|..|.|:| ||....|:.||::|.||..|.:.|:.|:|...:.::..
Human   480 GMTVAGGRGSKSGELPIFVTSVPPHGCLARDGRIKRGDVLLNINGIDLTNLSHSEAVAMLKASAA 544

  Fly   113 KIHFLLRNME-----------EDDPM----GQFEAGEEKSIVMRVPKP 145
            .....|:.:|           |:.|.    .:::|....|.||.:..|
Human   545 SPAVALKALEVQIVEEATQNAEEQPSTFSENEYDASWSPSWVMWLGLP 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 20/70 (29%)
LNX2NP_699202.1 mRING-HC-C3HC3D_LNX2 45..89 CDD:319694
modified RING-HC finger (C3HC3D-type) 50..87 CDD:319694
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..224
NPXY motif 208..211
PDZ 230..316 CDD:214570
PDZ 336..422 CDD:214570
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 418..455
PDZ_signaling 466..542 CDD:238492 20/61 (33%)
PDZ_signaling 599..683 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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