DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and Lnx1

DIOPT Version :9

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001153049.1 Gene:Lnx1 / 16924 MGIID:1278335 Length:728 Species:Mus musculus


Alignment Length:147 Identity:40/147 - (27%)
Similarity:68/147 - (46%) Gaps:35/147 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 KDDSR-WGFLITGGA---EFHMPLTVFQVTPNGLADKAG-IRLGDIILEINEEDASQLTLSQAHE 105
            ||.|. .|..:.|||   |:.:|:.|..|.|.|:..:.| |:.|||:|.:|..:.::::.::|..
Mouse   513 KDPSESLGMTVGGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVNGIELTEVSRTEAVA 577

  Fly   106 KINSTPKKIHFLLRNMEEDDPMGQFEAGEEKSIVMRVPKPL------PPPSGRIRASSIEMRLLE 164
            .:.|.|..:  :|:.:|    :.:.||.|:.|     |..|      .||..  .:.|..|.|  
Mouse   578 ILKSAPSSV--VLKALE----VKEQEAQEDCS-----PAALDSNHNVTPPGD--WSPSWVMWL-- 627

  Fly   165 MQRKLSAIAEIPKILCS 181
                     |:|:.||:
Mouse   628 ---------ELPQYLCN 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 23/77 (30%)
Lnx1NP_001153049.1 mRING-HC-C3HC3D_LNX1 42..83 CDD:319693
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 185..220
NPXY motif 185..188
Interaction with MAGEB18. /evidence=ECO:0000250 186..244
PDZ_signaling 276..360 CDD:238492
PDZ_signaling 384..464 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 481..500
PDZ_signaling 506..589 CDD:238492 23/77 (30%)
PDZ_signaling 637..721 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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