DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42319 and pdzd7a

DIOPT Version :9

Sequence 1:NP_001137648.1 Gene:CG42319 / 36473 FlyBaseID:FBgn0259219 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001177686.1 Gene:pdzd7a / 100332580 ZFINID:ZDB-GENE-090313-191 Length:954 Species:Danio rerio


Alignment Length:489 Identity:105/489 - (21%)
Similarity:165/489 - (33%) Gaps:147/489 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 YATKDDSRWGFLITGGAEFHMPLTVFQVTPNGLADKAGIRLGDIILEINEEDASQLTLSQAHEKI 107
            |.|.||...||.|.||.||.:.:.|.::.|.|||::.||::||.||..|......:|.|.|.|.:
Zfish   199 YTTSDDYCLGFNIRGGKEFGLGIYVSKLDPGGLAEQNGIKMGDQILAANGVSFEDITHSNAVEVL 263

  Fly   108 NSTPKKIHFLLRNMEEDDPMGQFEAGEEK----SIVMRVPKPLPPPSGRIRASSIEMRLLEMQRK 168
            .|   ..|.:|...|    .|::.|.:|.    |.:.::.....|.|.:...|......|.....
Zfish   264 KS---HTHVMLTIKE----AGRYPAYKEMVAEYSWLNKLANGGQPSSSQGSDSYSSTSSLSSGTP 321

  Fly   169 LSAIAEIPKILCSTLATVSQNFGRMSESEVDEDDVGEEEAYVQRKFSYDEDALDFELRNGEQAGD 233
            :|:::.:.::      |....||    ||:.:..:..|:    |......:.::..::...|..|
Zfish   322 VSSLSGLSQV------TFPPAFG----SEMVDVCISTED----RSRRPSSERIETAIQTDPQDPD 372

  Fly   234 TDSDEE------------DLVLVREE-----------------DAEDVDVPKGA---KQSKLLKD 266
            |.|...            :.||:::.                 |.|.:|.||.|   ..||..|.
Zfish   373 TISRTSRVMSTETSRMVGETVLLKDTVIRRGTAHSRTRTFSAGDKETLDSPKTAVLMALSKPRKA 437

  Fly   267 VTPESDY--ASEANYPANEAS----DDTESDDEDE-------------PGSTVY----FMKLP-A 307
            :.....:  .||..:....||    ..:.|..||:             .|||:.    |:.|| .
Zfish   438 IRRSQSHITVSEFWFATERASCLCGCTSRSRQEDKQKKRKHQKGKVETEGSTLQRSKTFVTLPFK 502

  Fly   308 AAAEDTYSSTEDEDDSDFLNTTYTWNLRNVPKLRINDAEAEGELTLGHQAREVPQQEQPQEKQPC 372
            :......||:.|..|:...:                          ||:.|    .:.|:.    
Zfish   503 SGRRRERSSSRDRKDTGRED--------------------------GHKGR----SKSPKH---- 533

  Fly   373 LEPEPPK-------------------VRPATPTPKAPPQESAEGQTQKLLFRLDKLERSWPWADR 418
            |:.||.|                   :|..:|.|........|...:|||..           |.
Zfish   534 LDNEPGKERGRPIINLLSSPRETRAGLREQSPMPSPETMALLEDVARKLLNE-----------DE 587

  Fly   419 EKIIYKQSTCHLVPRKPLGLVGQRMQLLLKDKKE 452
            ...:.:.....||.|....||  |..|.:.||.|
Zfish   588 VAAVMRHCKRFLVDRVVEDLV--RPLLAILDKPE 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42319NP_001137648.1 PDZ_signaling 45..119 CDD:238492 28/73 (38%)
pdzd7aNP_001177686.1 PDZ_signaling 69..149 CDD:238492
PDZ_signaling 194..274 CDD:238492 30/77 (39%)
HN_PDZD7_like 568..645 CDD:259824 15/65 (23%)
PDZ_signaling 860..948 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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