DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4714 and ccdc96

DIOPT Version :9

Sequence 1:NP_610857.2 Gene:CG4714 / 36470 FlyBaseID:FBgn0033819 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_001122170.1 Gene:ccdc96 / 559167 ZFINID:ZDB-GENE-081022-156 Length:479 Species:Danio rerio


Alignment Length:572 Identity:114/572 - (19%)
Similarity:212/572 - (37%) Gaps:175/572 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 EDIDYS-----VSLTGISIVSTRTLKTECDPDSVQLKTNFLRDFDVPSLSDISEEHDESSQSLDA 283
            |.::|:     |..|...:.:|:||:...|.:.|.                  ||..|..::.:.
Zfish     4 ESLEYTHEESFVLETDTLMENTKTLEGPADAEQVM------------------EEETEEPEAPNN 50

  Fly   284 GSVISVQQDHGFFADPTSNMDSGSSSSSESIGDVDKEQQ--AEE-----------AAPESEVDSF 335
            ...:...:......:.||..:    :|.:..|::..||.  .||           ..||:| .|.
Zfish    51 PEAVEEDKAEQLLTEDTSVPE----TSEQQTGEIQIEQHLITEEDPLMNETLEDTEGPETE-PSL 110

  Fly   336 DVSDIPEFDEIPVVKRVEQNQDSIDAFSTLSKVAFAVPEVRDDPVISHALEIKAVVRELLYDLFE 400
            :.|:..|.:|       |..::|:.|           ||..::..||...|.:|           
Zfish   111 EDSEDEEEEE-------EDEENSLPA-----------PEPENERSISPPEEPQA----------- 146

  Fly   401 ETASLSDIHNKDNKIRAKLDK------NKLLTELDKVITTYLYEKYTNEMVGNRLVEYYKRNRNA 459
                    |.:|.::...:.|      :||.:|.:|:       ...|:.:..|:.|::.:.:..
Zfish   147 --------HTEDEEVDPSIIKEKMELLHKLQSENEKL-------NKINQQLQTRIAEHFSKKKGD 196

  Fly   460 RVFATLSPENEKRFHSRYMHALALLDSLKYRLDVAKHKHAIQMNRVILDLHSAQSVASITEERLE 524
            :........:|:..:.:||..:|  |..:.:|..:|             ||         :||:|
Zfish   197 QHVKLDEDISEQEQYEKYMQLIA--DMKEQQLHFSK-------------LH---------QERME 237

  Fly   525 HLFREHLVRPESDNLRRLVDRELRMMTA---------------------------KRNEISDS-- 560
            .|   ||  ..|:.|:: |::|||...|                           |..|:...  
Zfish   238 DL---HL--QSSEKLKQ-VEQELRFFAALKYETVMKASLTGKVGKQETLAKVELLKAEELKQEDK 296

  Fly   561 ----RLFLITRKHTLGRIMGKIKELDTLSETLSIEDF--LSVQNNVFALQKKIEERNTDLKRMRT 619
                ||..|..|:.:.:....::....|.:.|.:.||  |..:|..|  ..|:|||:.:|.|::.
Zfish   297 LVCVRLNNIKLKNKISKYERALRSKRELVDGLLLMDFEQLKTENQSF--MDKLEERSEELHRLKK 359

  Fly   620 QFLMDVHLTRHNREKALALAENFELSKIRLKNAMKNQTD----LRRR-LYEVKLERKKMRQQSRD 679
            :....|....|.:||.     :|...:.:.|:....|||    |:|. |...:..|..:|..:..
Zfish   360 KVASSVQGISHVKEKL-----HFMQMENKAKHTQLAQTDTLVALKREVLTRTRQVRDGLRTDNLK 419

  Fly   680 MTFHGGILAMPSLMYDYD---NTVERLKEKRETV----AKLRETLKSLQRRL 724
            :....|::...:|:.||:   :|.|.|::|.|.:    |:|......:||::
Zfish   420 LQQRSGLMGNTTLLQDYEEKMDTSENLQQKLEMLKKHHAELSMKCAGVQRKI 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4714NP_610857.2 DUF4201 550..726 CDD:290581 47/222 (21%)
ccdc96NP_001122170.1 DUF4201 290..466 CDD:290581 43/182 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15654
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4874
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.130

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