DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4714 and ccdc96

DIOPT Version :9

Sequence 1:NP_610857.2 Gene:CG4714 / 36470 FlyBaseID:FBgn0033819 Length:732 Species:Drosophila melanogaster
Sequence 2:XP_002938310.2 Gene:ccdc96 / 100489589 XenbaseID:XB-GENE-1013157 Length:559 Species:Xenopus tropicalis


Alignment Length:626 Identity:152/626 - (24%)
Similarity:255/626 - (40%) Gaps:132/626 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 PTAIESPVHFTPEYMEEIRDNEVEEEEQEQVVTFDEPTIGDGESVSSSVLTDDSEDYPFHPPKLV 199
            ||....|.  .|:.::|.||.:....|.|    ..|||.|: |....|...||:.          
 Frog     5 PTGSSDPA--LPDSVQEERDADTGVRENE----VSEPTRGE-EHGKESETGDDNR---------- 52

  Fly   200 SLFPTYGFSDGP--ADRNIFQSDVKYEDIDYSVSLTGISIVSTRTLKTECDPDSVQLKTNFLRDF 262
               .:.|..|..  .|.|...:.:|.|      :.||.....:..:|     |..::..:..|..
 Frog    53 ---RSAGIKDEAEIGDDNGRSAGIKDE------AETGDDNGRSAGIK-----DEAEIGDDNGRVA 103

  Fly   263 DVPSLSDISEEHDES-SQSLDAGSVISVQQDHGFFADPTSNMDSGSSSSSESIGDVDKEQQAEEA 326
            |:...::::...:|. |:.:|..:..||.:.||..|        ||.||..|..|. .|:..|||
 Frog   104 DIEDEAELAHSGEEGPSEMVDLPAEGSVLETHGDGA--------GSRSSVHSREDT-TERAEEEA 159

  Fly   327 APESEV-----DSFDVSDIPEFDEIPVVKRVEQNQDSIDAFSTLSKVAFAVPEVRDDPVISHALE 386
            ....||     :..|.:|:..         |:|..||.:            |.:..:|..... |
 Frog   160 TTVEEVAVSGEEVMDTADLAS---------VKQWNDSTE------------PSLEQEPTAGEE-E 202

  Fly   387 IKAVVR-ELLYDLFE----ETASLSDIHNKDNKIRAKLDKNKLLTELDKVITTYLYEKYTNEMVG 446
            :|.... ::|.|..|    |.....|...::..|:   ....|:.|.|||       :..|..:.
 Frog   203 VKVEAEPQILIDNVEVLEGEEEDPDDKERREELIQ---QYQALIQERDKV-------QQHNAQLQ 257

  Fly   447 NRLVEYYKRNRNARVFATLSPENEKRF---HSRYMHALALLDSLKYR--LDVAKHKHAIQ----- 501
            |:|.||::|.:.    ..|.||.|||.   ..||:..|..|:.:|.:  .|.|.|:..|:     
 Frog   258 NKLYEYFRRKKG----EDLRPETEKRISDQEQRYLKYLTSLEEMKKKNMEDAAMHQQQIEELEAQ 318

  Fly   502 ----MNRVILDLHSAQ----SVASITEERLEHL-FREHLVRPESDNLRRLVDRELRMMTAKRNEI 557
                ::||..::.|.|    |||.:.   .:|. ..:|.....::.|.:|..:|.|    |..|:
 Frog   319 CLEVVSRVDKEMASFQEHKKSVALLA---YKHFGAGKHASSAFTEALAQLQAKEDR----KEKEV 376

  Fly   558 SDSRLFLITRKHTLGRIMGKIKELDTLSETLSIEDF--LSVQNNVFALQKKIEERNTDLKRMRTQ 620
            :...|..|..|:.:.:....::..:.|:|.|.:.||  |.::|..:  .:||||||.:|.::|.:
 Frog   377 TQVHLENIKLKNQISQFQSTLRSKEELAEGLHLIDFEQLKIENQTY--NEKIEERNEELLKLRKK 439

  Fly   621 FLMDVHLTRHNREKALAL-AENFELSK--IRLKNAMKNQTDLRRRLYEVKLERKKMRQQSRDMTF 682
            ....||...|.:||...: |||.|...  :.::..:.|:.|:   |.:.|..|..:|:.:..:..
 Frog   440 ITSTVHTLTHVKEKLQFMQAENQEKKDQLMEVEAVLANKRDI---LTKTKQARDSLRRDNLKLKQ 501

  Fly   683 HGGILAMPSLMYDYDNTVERLKEKRETVAKLRETLKSLQRR 723
            ..|:|....|:.|:::.|:      ||.. |.:.|:||:||
 Frog   502 RSGLLDNKLLLKDFEDKVD------ETEV-LSQKLESLKRR 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4714NP_610857.2 DUF4201 550..726 CDD:290581 48/179 (27%)
ccdc96XP_002938310.2 MDN1 <10..289 CDD:227596 82/354 (23%)
SMC_prok_B <229..501 CDD:274008 75/297 (25%)
DUF4201 369..542 CDD:372770 50/183 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I5015
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto103964
Panther 1 1.100 - - O PTHR15654
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.060

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