DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4712 and ccdc96

DIOPT Version :9

Sequence 1:NP_610856.1 Gene:CG4712 / 36469 FlyBaseID:FBgn0033818 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001122170.1 Gene:ccdc96 / 559167 ZFINID:ZDB-GENE-081022-156 Length:479 Species:Danio rerio


Alignment Length:642 Identity:126/642 - (19%)
Similarity:228/642 - (35%) Gaps:223/642 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 EERLKIIRKEERKLAIKDIMNRLK----ERDAEEMKMKKSGEQEGDQREDEM-ASKSQDSIQRHM 114
            ||.|:...:|...|....:|...|    ..|||::..:::.|.|.....:.: ..|::..:....
Zfish     3 EESLEYTHEESFVLETDTLMENTKTLEGPADAEQVMEEETEEPEAPNNPEAVEEDKAEQLLTEDT 67

  Fly   115 SISQVEEQDDETLLWTKLGEDIDSDNRRTTDIAPAADTLDAVNAEDEDMLDLIETPSESDSEAPV 179
            |:.:..||        :.|| |..:....|:             ||..|.:.:|     |:|.|.
Zfish    68 SVPETSEQ--------QTGE-IQIEQHLITE-------------EDPLMNETLE-----DTEGPE 105

  Fly   180 TERSKSIDPMKVAVKSLMLVPSLSDI------------SLPSAPPTSRKSSHSIKSNRSLIFKSS 232
            ||                  |||.|.            |||:..|.:.:|.            |.
Zfish   106 TE------------------PSLEDSEDEEEEEEDEENSLPAPEPENERSI------------SP 140

  Fly   233 PTDGNSSFDTEESEEESTIGPIDP---RTPMDQLYDSLSICESLAPIKDEFSRTTA--LEKERND 292
            |.:..:..:.||         :||   :..|:.|:...|..|.|..|..:.....|  ..|::.|
Zfish   141 PEEPQAHTEDEE---------VDPSIIKEKMELLHKLQSENEKLNKINQQLQTRIAEHFSKKKGD 196

  Fly   293 YMGFEQLFTVTTEHLETDEIDVAAQLRTIETSQVISEFINHLIHKVVMPEHRGTEEYIRVRLDKE 357
                        :|::.|| |::.|.:..:..|:|::.....:|...:.:.|..:.:::   ..|
Zfish   197 ------------QHVKLDE-DISEQEQYEKYMQLIADMKEQQLHFSKLHQERMEDLHLQ---SSE 245

  Fly   358 KLLVALQNEVHDYTSVRDHNKQLEERMVDYFRRTKNFRYFDRLTPNAESTYSRRLDHALTYLSYG 422
            ||                  ||:|:.:          |:|..|                      
Zfish   246 KL------------------KQVEQEL----------RFFAAL---------------------- 260

  Fly   423 QERLIRVREKYGILMTTAFLDLANAMNIVLSTEHHLEQTLKRILVRPDAETDFLKRLVARELRLM 487
                     ||..:|..:           |:.:...::||        |:.:.||   |.||:  
Zfish   261 ---------KYETVMKAS-----------LTGKVGKQETL--------AKVELLK---AEELK-- 292

  Fly   488 ADHRNQISDARLLLMSQKHTLARILEKIRDVETVCDGVSLNDFISVQNKTIGLEKKIEERNIELK 552
              ..:::...||..:..|:.:::....:|....:.||:.|.||..::.:......|:|||:.||.
Zfish   293 --QEDKLVCVRLNNIKLKNKISKYERALRSKRELVDGLLLMDFEQLKTENQSFMDKLEERSEELH 355

  Fly   553 RQRRLYHTELHMTKHNREKSH--ELKNKIHVLKDNLLEKHKLKNKLKSELCRRKLEHKAIRRRMR 615
            |.::...:.:....|.:||.|  :::||   .|...|.:......||.|:..|       .|::|
Zfish   356 RLKKKVASSVQGISHVKEKLHFMQMENK---AKHTQLAQTDTLVALKREVLTR-------TRQVR 410

  Fly   616 D--------LTCQGGILAMPALMYDYDRTVAYVREKEKMVSSLRETLKSLTNQLQSL 664
            |        |..:.|::....|:.||:         |||     :|.::|..:|:.|
Zfish   411 DGLRTDNLKLQQRSGLMGNTTLLQDYE---------EKM-----DTSENLQQKLEML 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4712NP_610856.1 DUF4201 487..662 CDD:290581 41/184 (22%)
ccdc96NP_001122170.1 DUF4201 290..466 CDD:290581 45/192 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15654
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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