DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE14 and Gstt1

DIOPT Version :9

Sequence 1:NP_610855.1 Gene:GstE14 / 36467 FlyBaseID:FBgn0033817 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_445745.1 Gene:Gstt1 / 25260 RGDID:2765 Length:240 Species:Rattus norvegicus


Alignment Length:258 Identity:64/258 - (24%)
Similarity:111/258 - (43%) Gaps:65/258 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LYYDERSPPVRSCLMLIKLLDIDVELRFVNLFKGEQFQKDFLALNPQHSVPTLVHGDLVLTDSHA 72
            ||.|..|.|.|:..:..|..:|..::..|.|.|||.....|..:||...||.:..|...|.:|.|
  Rat     5 LYLDLLSQPCRAIYIFAKKNNIPFQMHTVELRKGEHLSDAFAQVNPMKKVPAMKDGGFTLCESVA 69

  Fly    73 ILIHLAEKFDEGGSLWPQEHAERMKVLNLLLFECSFLFRRD--------------------SDFM 117
            ||::||.|:......:||:...|.:|...|.::.:.| ||.                    .:.:
  Rat    70 ILLYLAHKYKVPDHWYPQDLQARARVDEYLAWQHTTL-RRSCLRTLWHKVMFPVFLGEQIRPEML 133

  Fly   118 SATVRQGFANVDVAHHERKLTEAYIIMERYLENSDFMAGPQLTLADLSIVTTLSTVNLMFPL--- 179
            :||:    |::||        ...::.:::|::.||:.||.::|||:..:|     .||.|:   
  Rat   134 AATL----ADLDV--------NVQVLEDQFLQDKDFLVGPHISLADVVAIT-----ELMHPVGGG 181

  Fly   180 ----SQFPRLRRWFTAMQQ-------LDAYEANCSGLEKLRQTMESVGSFQFPSSSAVVTEKV 231
                ...|||..|:..::.       |:|:|.    :.|:|..         |.:..|:.:|:
  Rat   182 CPVFEGRPRLAAWYRRVEAAVGKDLFLEAHEV----ILKVRDC---------PPADPVIKQKL 231

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
GstE14NP_610855.1 GstA 6..200 CDD:223698 58/225 (26%)
GST_N_Delta_Epsilon 6..79 CDD:239343 25/70 (36%)
GST_C_Delta_Epsilon 94..209 CDD:198287 31/148 (21%)
Gstt1NP_445745.1 GST_N_Theta 3..78 CDD:239348 26/72 (36%)