DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4679 and AT1G64580

DIOPT Version :9

Sequence 1:NP_610854.1 Gene:CG4679 / 36466 FlyBaseID:FBgn0033816 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_176639.2 Gene:AT1G64580 / 842766 AraportID:AT1G64580 Length:523 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4679NP_610854.1 PLN03218 <210..>348 CDD:215636
PPR repeat 228..255 CDD:276811
PPR repeat 261..295 CDD:276811
AT1G64580NP_176639.2 PPR_2 77..126 CDD:289786
PPR repeat 79..108 CDD:276811
PPR repeat 116..143 CDD:276811
PPR_1 144..175 CDD:289614
PPR_2 147..196 CDD:289786
PPR repeat 151..178 CDD:276811
PPR_1 179..211 CDD:289614
PPR_2 182..231 CDD:289786
PPR repeat 184..213 CDD:276811
PPR_1 213..246 CDD:289614
PPR repeat 219..248 CDD:276811
PPR_2 252..300 CDD:289786
PPR repeat 256..283 CDD:276811
PPR 257..289 CDD:273253
PPR_2 287..336 CDD:289786
PPR 290..324 CDD:273253
PPR repeat 291..318 CDD:276811
PPR_1 318..350 CDD:289614
PPR repeat 326..353 CDD:276811
PPR_1 353..386 CDD:289614
PPR_2 358..406 CDD:289786
PPR repeat 359..388 CDD:276811
PPR_1 389..419 CDD:289614
PPR repeat 394..423 CDD:276811
PPR_2 428..476 CDD:289786
PPR repeat 429..458 CDD:276811
PPR 430..464 CDD:273253
PPR_1 458..491 CDD:289614
PPR repeat 464..493 CDD:276811
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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