DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4679 and AT1G63400

DIOPT Version :9

Sequence 1:	NP_610854.1	Gene:	CG4679 / 36466	FlyBaseID:	FBgn0033816	Length:	652	Species:	Drosophila melanogaster
Sequence 2:	NP_176529.1	Gene:	AT1G63400 / 842646	AraportID:	AT1G63400	Length:	577	Species:	Arabidopsis thaliana

Alignment Length:	399	Identity:	84/399 - (21%)
Similarity:	158/399 - (39%)	Gaps:	85/399 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   124 MVYTEDSVVDETSLAQLISQGELKDAVLVYNLLEQKGNPISPELKQ--SLLELVCFHNNQEPIPE 186
            |.|..|::...|.:..|....:..:||.:.:.:.|:|  ..|.|..  .::..:|
plant   184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--CQPNLVTYGVVVNGLC---------- 236

  Fly   187 EYIEERWFLQNNKRRERSGKTWKDGDLAEKLYSEIEPKTPQS----YASLIRGMAKYLQCERAYA 247
                        ||        .|.|||..|.:::|....::    |:::|..:.||...:.|..
plant   237 ------------KR--------GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281

  Fly   248 LLQEAGEKQVQLDTNTFNSVIEIVSFLKDTAEQRWQLCKDLLNEMSQQKLRPNLGTLNAVLQCIS 312
            |..|...|.|:.:..|::|:|..:     ...:||.....||::|.::|:.||:.|.||::....
plant   282 LFTEMENKGVRPNVITYSSLISCL-----CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341

  Fly   313 TFGNFKVARAAALQALPEFKQLGVNPSLGSYYYLLIIFCRERGPVSHVIVDILNDISGKEFQIQH 377
            ..|  |:..|..|  ..|..:..::|.:.:|..|:..||..         |.| |.:...|::..
plant   342 KEG--KLVEAEKL--YDEMIKRSIDPDIFTYSSLINGFCMH---------DRL-DEAKHMFELMI 392

  Fly   378 PKDTY----FFATAMD-VCRNHLHDKSLAKKVD---ELLHTGKNYDLVGDSFKESIYYRNYLALL 434
            .||.:    .:.|.:: .|:        ||::|   ||........|||:    ::.|...:...
plant   393 SKDCFPNVVTYNTLINGFCK--------AKRIDEGVELFREMSQRGLVGN----TVTYTTLIHGF 445

  Fly   435 CQTESTEDFMLSYDLLVPNIYIPEPGIMEEILRAIEINGAVEYVPRLWSDMVVFDHTHRESL--L 497
            .|....::..:.:..:|.:...|.......:|..:..||.:|      ..||||::..|..:  .
plant   446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE------KAMVVFEYLQRSKMEPT 504

  Fly   498 LYVLRILVD 506
            :|...|:::
plant   505 IYTYNIMIE 513

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4679	NP_610854.1	PLN03218	<210..>348	CDD:215636	37/141 (26%)
		PPR repeat	228..255	CDD:276811	7/30 (23%)
		PPR repeat	261..295	CDD:276811	8/33 (24%)
AT1G63400	NP_176529.1	PPR_2	83..132	CDD:289786
		PPR repeat	88..114	CDD:276811
		PPR_2	119..167	CDD:289786
		PPR	121..155	CDD:273253
		PPR repeat	122..149	CDD:276811
		PPR_1	150..182	CDD:289614
		PPR_2	153..200	CDD:289786	4/15 (27%)
		PPR repeat	157..184	CDD:276811	84/399 (21%)
		PPR_1	184..217	CDD:289614	7/32 (22%)
		PPR_2	188..237	CDD:289786	10/72 (14%)
		PPR repeat	190..219	CDD:276811	4/28 (14%)
		PPR_1	219..252	CDD:289614	11/64 (17%)
		PPR repeat	225..252	CDD:276811	9/56 (16%)
		PPR_2	259..307	CDD:289786	12/52 (23%)
		PPR	261..295	CDD:273253	9/33 (27%)
		PPR repeat	262..289	CDD:276811	7/26 (27%)
		PPR_1	289..321	CDD:289614	9/36 (25%)
		PPR repeat	297..324	CDD:276811	8/31 (26%)
		PPR_1	324..356	CDD:289614	10/35 (29%)
		PPR_2	328..376	CDD:289786	13/51 (25%)
		PPR repeat	332..359	CDD:276811	8/30 (27%)
		PPR repeat	365..394	CDD:276811	8/38 (21%)
		PPR	366..400	CDD:273253	10/43 (23%)
		PPR_1	394..427	CDD:289614	9/40 (23%)
		PPR_2	398..445	CDD:289786	11/58 (19%)
		PPR repeat	400..429	CDD:276811	7/36 (19%)
		PPR_1	429..462	CDD:289614	5/36 (14%)
		PPR repeat	435..464	CDD:276811	3/28 (11%)
		PPR_1	464..494	CDD:289614	8/35 (23%)
		PPR_2	468..517	CDD:289786	12/52 (23%)
		PPR repeat	470..499	CDD:276811	8/34 (24%)
		PPR_2	503..552	CDD:289786	2/11 (18%)
		PPR repeat	505..534	CDD:276811	2/9 (22%)
		PPR	506..540	CDD:273253	2/8 (25%)
		PPR_1	534..567	CDD:289614
		PPR_2	538..>577	CDD:289786
		PPR repeat	540..569	CDD:276811
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910