DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4679 and AT1G63230

DIOPT Version :9

Sequence 1:NP_610854.1 Gene:CG4679 / 36466 FlyBaseID:FBgn0033816 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_176512.2 Gene:AT1G63230 / 842628 AraportID:AT1G63230 Length:323 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4679NP_610854.1 PLN03218 <210..>348 CDD:215636
PPR repeat 228..255 CDD:276811
PPR repeat 261..295 CDD:276811
AT1G63230NP_176512.2 PPR_1 5..37 CDD:289614
PPR_2 8..53 CDD:289786
PPR repeat 10..39 CDD:276811
PPR repeat 44..70 CDD:276811
PPR 44..69 CDD:279828
PPR_2 76..123 CDD:289786
PPR 77..111 CDD:273253
PPR repeat 78..105 CDD:276811
PPR_1 105..137 CDD:289614
PPR_2 109..158 CDD:289786
PPR repeat 113..140 CDD:276811
PPR_2 144..193 CDD:289786
PPR 147..181 CDD:273253
PPR repeat 148..175 CDD:276811
PPR_1 175..207 CDD:289614
PPR repeat 181..210 CDD:276811
PPR_1 210..242 CDD:289614
PPR_2 214..263 CDD:289786
PPR repeat 216..245 CDD:276811
PPR_1 245..277 CDD:289614
PPR_2 250..297 CDD:289786
PPR repeat 251..280 CDD:276811
PPR repeat 286..315 CDD:276811
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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