Protein Alignment CG4679 and RPF3

DIOPT Version :9

• Sequence 1: NP_610854.1
• Gene: CG4679 / 36466
• FlyBaseID: FBgn0033816
• Length: 652
• Species: Drosophila melanogaster
• Sequence 2: NP_176481.2
• Gene: RPF3 / 842594
• AraportID: AT1G62930
• Length: 629
• Species: Arabidopsis thaliana
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4679	NP_610854.1	PLN03218	<210..>348	CDD:215636
		PPR repeat	228..255	CDD:276811
		PPR repeat	261..295	CDD:276811
RPF3	NP_176481.2	PPR repeat	54..74	CDD:276811
		PPR_2	78..127	CDD:289786
		PPR repeat	83..109	CDD:276811
		PPR_2	114..162	CDD:289786
		PPR	116..150	CDD:273253
		PPR repeat	117..144	CDD:276811
		PPR_1	145..176	CDD:289614
		PPR_2	148..195	CDD:289786
		PPR repeat	152..179	CDD:276811
		PPR_2	183..232	CDD:289786
		PPR repeat	185..214	CDD:276811
		PPR	186..219	CDD:273253
		PPR_1	214..247	CDD:289614
		PPR repeat	222..249	CDD:276811
		PPR_2	254..302	CDD:289786
		PPR	256..290	CDD:273253
		PPR repeat	257..284	CDD:276811
		PPR_1	284..316	CDD:289614
		PPR repeat	292..319	CDD:276811
		PPR_1	319..351	CDD:289614
		PPR_2	323..371	CDD:289786
		PPR repeat	327..354	CDD:276811
		PPR repeat	360..389	CDD:276811
		PPR	361..395	CDD:273253
		PPR_1	389..422	CDD:289614
		PPR_2	393..440	CDD:289786
		PPR repeat	395..424	CDD:276811
		PPR_2	429..477	CDD:289786
		PPR repeat	430..459	CDD:276811
		PPR	431..461	CDD:279828
		PPR_1	459..489	CDD:289614
		PPR_2	463..512	CDD:289786
		PPR repeat	465..494	CDD:276811
		PPR_2	498..547	CDD:289786
		PPR repeat	500..529	CDD:276811
		PPR	501..535	CDD:273253
		PPR_1	529..562	CDD:289614
		PPR_2	533..579	CDD:289786
		PPR repeat	535..564	CDD:276811
		PPR_2	568..615	CDD:289786
		PPR repeat	570..598	CDD:276811
		PPR repeat	605..629	CDD:276811

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910