DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4679 and NG1

DIOPT Version :9

Sequence 1:NP_610854.1 Gene:CG4679 / 36466 FlyBaseID:FBgn0033816 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_176459.2 Gene:NG1 / 842570 AraportID:AT1G62720 Length:485 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4679NP_610854.1 PLN03218 <210..>348 CDD:215636
PPR repeat 228..255 CDD:276811
PPR repeat 261..295 CDD:276811
NG1NP_176459.2 PPR_2 67..116 CDD:289786
PPR repeat 71..98 CDD:276811
PPR_2 103..151 CDD:289786
PPR 105..139 CDD:273253
PPR repeat 106..133 CDD:276811
PPR_1 134..166 CDD:289614
PPR_2 137..186 CDD:289786
PPR repeat 141..168 CDD:276811
PPR_1 168..201 CDD:289614
PPR_2 172..220 CDD:289786
PPR repeat 174..203 CDD:276811
PPR_1 203..236 CDD:289614
PPR repeat 211..238 CDD:276811
PPR_1 238..270 CDD:289614
PPR_2 242..290 CDD:289786
PPR repeat 246..273 CDD:276811
PPR_1 273..306 CDD:289614
PPR_2 277..326 CDD:289786
PPR repeat 279..308 CDD:276811
PPR_1 308..340 CDD:289614
PPR_2 312..359 CDD:289786
PPR repeat 314..340 CDD:276811
PPR_1 343..375 CDD:289614
PPR_2 348..392 CDD:289786
PPR repeat 349..378 CDD:276811
PPR 382..416 CDD:273253
PPR repeat 383..410 CDD:276811
PPR_2 415..463 CDD:289786
PPR repeat 416..445 CDD:276811
PPR 418..451 CDD:273253
PPR_1 445..478 CDD:289614
PPR_2 449..>484 CDD:289786
PPR repeat 451..480 CDD:276811
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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