Protein Alignment CG4679 and RPF1

DIOPT Version :9

• Sequence 1: NP_610854.1
• Gene: CG4679 / 36466
• FlyBaseID: FBgn0033816
• Length: 652
• Species: Drosophila melanogaster
• Sequence 2: NP_001320720.1
• Gene: RPF1 / 837825
• AraportID: AT1G12700
• Length: 618
• Species: Arabidopsis thaliana
• Alignment Length: 521
• Identity: 107/521 - (20%)
• Similarity: 200/521 - (38%)
• Gaps: 142/521 - (27%)

  Fly   205 GKTWKDGDLAEKLYSEIEPKTPQSYASLIRGMAKYLQCERAYALLQEAGEKQVQLDTNTFNSVIE 269
            ||..|.|         .||.| .::.:||:|:....:...|..|:....|...|.|..|:||::.
plant   163 GKVMKLG---------YEPDT-TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 217

  Fly   270 IVSFLKDTAEQRWQLCKDLLNEMSQQKLRPNLGTLNAVLQCISTFGNFKVARAAALQALPEFKQL 334
            .:....||:     |..|||.:|.::.::.::.|.:.::..:...|...    ||:....|.:..
plant   218 GICRSGDTS-----LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID----AAISLFKEMETK 273

  Fly   335 GVNPSLGSYYYLLIIFCR---------------ERGPVSHVIV-DILNDISGKEFQIQHPKDTY- 382
            |:..|:.:|..|:...|:               .|..|.:||. ::|.|:..||.::|...:.|
plant   274 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 338

  Fly   383 ------------FFATAMD-VC-RNHLHDKSLAKKVDELLHTGKNYDLVGDSFKESIYYRNYLAL 433
                        .:.|.|| .| :|.|.:.:  ..:|.::....:.|:|  :|...|  :.|
plant   339 EMITRGISPNIITYNTLMDGYCMQNRLSEAN--NMLDLMVRNKCSPDIV--TFTSLI--KGY--- 394

  Fly   434 LCQTESTEDFM---------------LSYDLLVPNIYIPEPGIMEEILRAIEINGAVEYVPRLWS 483
             |..:..:|.|               ::|.:||       .|..:        :|.::....|:.
plant   395 -CMVKRVDDGMKVFRNISKRGLVANAVTYSILV-------QGFCQ--------SGKIKLAEELFQ 443

  Fly   484 DMVVFDHTHRESLLLYVLRILVDNKPNPDSPAQAQLPEQG-AKVALDMFERVEEAIKRLRKVSFT 547
            :||  .|.....::.|  .||:|.           |.:.| .:.||::||.::::...|..|.:|
plant   444 EMV--SHGVLPDVMTY--GILLDG-----------LCDNGKLEKALEIFEDLQKSKMDLGIVMYT 493

  Fly   548 GQMLGDILTLLVRGGSYEKATEVFAHIDKNQHRIPGTPSLNALIEFVDASVQEKSPSQALFALQY 612
                 .|:..:.:||..|.|..:|..:.....:    |::......:....::.|.|:|...|:.
plant   494 -----TIIEGMCKGGKVEDAWNLFCSLPCKGVK----PNVMTYTVMISGLCKKGSLSEANILLRK 549

  Fly   613 AVEN------------------NFDSRELAKRIHE----GFTLNETHLSKLKSLV--GE---SFL 650
            ..|:                  :.|....||.|.|    ||:.:.:.:..:..::  ||   |||
plant   550 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFL 614

  Fly   651 D 651
            |
plant   615 D 615

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4679	NP_610854.1	PLN03218	<210..>348	CDD:215636	31/137 (23%)
		PPR repeat	228..255	CDD:276811	5/26 (19%)
		PPR repeat	261..295	CDD:276811	10/33 (30%)
RPF1	NP_001320720.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910