DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4679 and AT1G06580

DIOPT Version :9

Sequence 1:NP_610854.1 Gene:CG4679 / 36466 FlyBaseID:FBgn0033816 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_172145.1 Gene:AT1G06580 / 837169 AraportID:AT1G06580 Length:500 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4679NP_610854.1 PLN03218 <210..>348 CDD:215636
PPR repeat 228..255 CDD:276811
PPR repeat 261..295 CDD:276811
AT1G06580NP_172145.1 PPR_2 77..126 CDD:289786
PPR repeat 81..108 CDD:276811
PPR_2 113..161 CDD:289786
PPR 115..149 CDD:273253
PPR repeat 116..143 CDD:276811
PPR_1 144..174 CDD:289614
PPR_2 147..195 CDD:289786
PPR repeat 149..178 CDD:276811
PPR_1 179..211 CDD:289614
PPR_2 182..226 CDD:289786
PPR repeat 184..213 CDD:276811
PPR repeat 221..248 CDD:276811
PPR_1 248..280 CDD:289614
PPR_2 252..300 CDD:289786
PPR repeat 256..283 CDD:276811
PPR_1 283..313 CDD:289614
PPR_2 287..336 CDD:289786
PPR repeat 291..318 CDD:276811
PPR_1 318..351 CDD:289614
PPR repeat 324..353 CDD:276811
PPR_2 358..406 CDD:289786
PPR repeat 359..387 CDD:276811
PPR 360..393 CDD:273253
PPR_1 389..419 CDD:289614
PPR repeat 394..423 CDD:276811
PPR_2 429..474 CDD:289786
PPR repeat 429..458 CDD:276811
PPR 430..464 CDD:273253
PPR_2 462..>498 CDD:289786
PPR repeat 464..493 CDD:276811
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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