Protein Alignment CG4679 and Ptcd3

DIOPT Version :9

• Sequence 1: NP_610854.1
• Gene: CG4679 / 36466
• FlyBaseID: FBgn0033816
• Length: 652
• Species: Drosophila melanogaster
• Sequence 2: XP_038964069.1
• Gene: Ptcd3 / 500199
• RGDID: 1565582
• Length: 747
• Species: Rattus norvegicus
• Alignment Length: 675
• Identity: 205/675 - (30%)
• Similarity: 329/675 - (48%)
• Gaps: 78/675 - (11%)

  Fly    37 IEIPNRIERSPTDLLQALASTVARDYTAPHYKYHDDPFLIPMSNAAKRTYAMSKESGRKAAKWIK 101
            |.||.:.......:||||||||.||.||..|.:.|||:|||.|....|::.::|:||..|||:|.
  Rat    82 IVIPKKKTWDKVAVLQALASTVTRDPTAAPYVFQDDPYLIPTSAMESRSFLLAKKSGETAAKFII 146

  Fly   102 EEHRELFMHQEAQPAIEKFAPSMVYTEDSVVDETSLAQLISQGELKDAVLVYNLLEQKGNPISPE 166
            ..|.:.|....|:|.|....|..:..:...|.|.:|.:.:....:|.:|.:::.|.|.|..:|.|
  Rat   147 NSHPKYFQKDIAEPHIPCLMPEYLEPQIEGVSEAALKERVKLKRVKASVDIFDQLLQAGTTVSLE 211

  Fly   167 LKQSLLELVCFHNNQEPIPEEY----------IEERWFLQNNKRRERSGKTWKDGDLAEKLYSEI 221
            ...|||:|:|::.:||| |.:|          :||.....|...|..|| .||..:.||::::.:
  Rat   212 TTNSLLDLLCYYGDQEP-PADYPFQQTEHLENLEEAAEENNQTPRMESG-LWKAQNNAERIFALM 274

  Fly   222 EPKTPQSYASLIRGMAKYLQCERAYA----LLQEAGEKQVQLDTNTFNSVIEIVSFL-KDTAEQR 281
            ..|..:||.::||||.|:    ||||    |..|....::..|..|||::||..:|: .:..|::
  Rat   275 PEKNARSYCTMIRGMVKH----RAYAQALNLYTELLNNRLSADVYTFNALIEAKTFIPNEKFEEK 335

  Fly   282 WQLCKDLLNEMSQQKLRPNLGTLNAVLQCISTFGNFKVARAAALQALPEFKQLGVNPSLGSYYYL 346
            |....|||..|..||::|||.|.|..|:|:..|  ..:.|..|||.|.|.|.:|:.|||.:|:::
  Rat   336 WNDILDLLRHMVAQKVKPNLQTFNTTLKCLRKF--HSLGRLPALQILREMKHIGIEPSLATYHHI 398

  Fly   347 LIIFCRERGPV---SHVIVDILNDISGKEFQIQHPKDTYFFATAMDVCRNHLHDKSLAKKVDELL 408
            :.:|......:   |.:|.||:|::.|:.|..|...|..||.:||.|| :.|.|..||.::..||
  Rat   399 IHLFYPRGSSIKIPSLIIYDIMNELEGRTFSPQDLDDDKFFQSAMTVC-SSLRDLELAYQLHGLL 462

  Fly   409 HTGKNYDLVGDSFKESIYYRNYLALLCQTESTEDFMLSYDLLVPNIYIPEPGIMEEILRAIEING 473
            :||.|..|:|...:...||..:.:|:|..|..:..:..|..|:|::::|...|...:|:|:::..
  Rat   463 NTGDNRKLIGPDSQRKAYYSKFFSLICSLEQIDVTLKWYKDLIPSVFLPHSQIFIGLLQAVDVAN 527

  Fly   474 AVEYVPRLWSDMVVFDHTHRESLLLYVLRILVDNKPNPDSPAQAQLPEQGAKVALDMFERVEEAI 538
            .:|.||::|.|...:.||.|.:|...||.::..:|.:|      :|....|..|.|:....|...
  Rat   528 RLEMVPQIWKDSKEYGHTFRGALREEVLMLMARDKHSP------ELQVAFADCAADIKSTYENQD 586

  Fly   539 KRLRKVSFTGQMLGDILTLLVRGGSYEKATEV--------------------------------- 570
            .|...:.:....|..|..|.:|||..::|.||
  Rat   587 ARQTALDWPANPLHYIAFLFLRGGRTQEAWEVDHTMKQAVMIGAGVRTSAESWELNVCALPLSCM 651

  Fly   571 --FAHIDKNQHRIPGTPSLNALIEFVDASVQEKSPSQALFALQYAVENNFD-SRELAKRIHEGFT 632
              ...:.:..::||....|.   ||:|.:....|.:.|:..::.|...:.. |..||:|:...||
  Rat   652 WKMLTLFRKHNKIPRNELLE---EFMDTAKASSSTTLAIEVVRLASAFSLPISESLAQRVMMDFT 713

  Fly   633 LNE------THLSKLKSLVGESFLD 651
            ::.      ::|:.|.|..|||..|
  Rat   714 VDPEQKEALSNLTALNSSDGESSSD 738

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4679	NP_610854.1	PLN03218	<210..>348	CDD:215636	51/142 (36%)
		PPR repeat	228..255	CDD:276811	13/30 (43%)
		PPR repeat	261..295	CDD:276811	12/34 (35%)
Ptcd3	XP_038964069.1	PPR_2	277..323	CDD:404055	19/49 (39%)
		PPR repeat	281..308	CDD:276811	13/30 (43%)
		PPR repeat	314..349	CDD:276811	12/34 (35%)
		PPR_3	342..405	CDD:316342	26/64 (41%)
		PPR repeat	355..384	CDD:276811	12/30 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166352897
Domainoid	1	1.000	109	1.000	Domainoid score	I6243
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H41211
Inparanoid	1	1.050	285	1.000	Inparanoid score	I2776
OMA	1	1.010	-	-		QHG46509
OrthoDB	1	1.010	-	-		D197549at33208
OrthoFinder	1	1.000	-	-		FOG0005556
OrthoInspector	1	1.000	-	-		oto95703
orthoMCL	1	0.900	-	-		OOG6_106573
Panther	1	1.100	-	-	LDO	PTHR16276
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X4519
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	14	13.910