DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4676 and PFA3

DIOPT Version :10

Sequence 1:NP_610853.1 Gene:CG4676 / 36465 FlyBaseID:FBgn0033815 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_014073.1 Gene:PFA3 / 855390 SGDID:S000005270 Length:336 Species:Saccharomyces cerevisiae


Alignment Length:301 Identity:69/301 - (22%)
Similarity:111/301 - (36%) Gaps:78/301 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PRSISDFACFLLVAVFVPVTYIFHVTIVMPELFAIGGIWYTLLWLASLFLIFNITS--------- 67
            ||.::  .|..:...::.:|.|..:    |..|....|..||  ..:|:..:.:.:         
Yeast    12 PRCLT--TCLYIWTAYITLTRIHQI----PRWFLALTIVPTL--AVALYTYYKVIARGPGSPLDF 68

  Fly    68 -NMLACMLVDTSIRKELLKPP-------LDAAQLARWHSCQDCQTLVPPRSWHCEVCNVCVLKRD 124
             ::|...|.......||  ||       |......|:..||.|....|.|..||..|:||:||.|
Yeast    69 PDLLVHDLKAAENGLEL--PPEYMSKRCLTLKHDGRFRVCQVCHVWKPDRCHHCSSCDVCILKMD 131

  Fly   125 HHCRFTCCCIGHHNYRYFFYYLVYMIIGSLAAAIMESIYLWHLHLDIYWRWSTLFTIFAPVVSLM 189
            |||.:...|.|..|.::|..:|:|                           :||:.....:.:..
Yeast   132 HHCPWFAECTGFRNQKFFIQFLMY---------------------------TTLYAFLVLIYTCY 169

  Fly   190 LSPSW---ESFYLVIYDLTLLGFAISSL-----LLVFH----WSIFKSGSVTRERGTRKYDRGLR 242
            ...:|   .||...:.|..|||.|:.::     :|.|.    :.:.|:.:.....|.|:|    |
Yeast   170 ELGTWFNSGSFNRELIDFHLLGVALLAVAVFISVLAFTCFSIYQVCKNQTTIEVHGMRRY----R 230

  Fly   243 GNLEMV---LGKRMHLTWLSPFLRSDLPHDGMNWEPIAAFS 280
            .:||::   .|...||..:     .||.....||:.|...|
Yeast   231 RDLEILNDSYGTNEHLENI-----FDLGSSMANWQDIMGTS 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4676NP_610853.1 DHHC 99..232 CDD:396215 35/144 (24%)
PFA3NP_014073.1 COG5273 1..304 CDD:227598 69/301 (23%)

Return to query results.
Submit another query.