DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4676 and zdhhc18b

DIOPT Version :10

Sequence 1:NP_610853.1 Gene:CG4676 / 36465 FlyBaseID:FBgn0033815 Length:284 Species:Drosophila melanogaster
Sequence 2:XP_009292400.1 Gene:zdhhc18b / 334383 ZFINID:ZDB-GENE-030131-6315 Length:464 Species:Danio rerio


Alignment Length:184 Identity:48/184 - (26%)
Similarity:71/184 - (38%) Gaps:63/184 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FACFLLVAVFVPVTYIFHVTIVMPELFAIGGIWYTLLWLASLFLIFNITSNMLACMLVDTSIRKE 82
            |.|..||.         |:|..:|   ||||:.:          :|.|.|      |:.||....
Zfish    79 FDCPFLVK---------HLTSCIP---AIGGVLF----------VFVIIS------LLQTSFTDP 115

  Fly    83 LLKP---PLDAA-----------------------------QLARWHSCQDCQTLVPPRSWHCEV 115
            .:.|   |.:||                             |:.:...|..|:...|||:.||.:
Zfish   116 GILPRATPEEAADIEKQIDNPTGSSSSYRPPPRTKEVVINQQVVKLKYCFTCKIFRPPRTSHCSL 180

  Fly   116 CNVCVLKRDHHCRFTCCCIGHHNYRYFFYYLVYMIIGSLAAAIMESIYLWHLHL 169
            |:.||.:.||||.:...|:|..|||:|:.::|.:   |...|.:......||.|
Zfish   181 CDNCVERFDHHCPWVGNCVGKRNYRFFYTFIVSL---SFLTAFIFGCVTTHLAL 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4676NP_610853.1 DHHC 99..232 CDD:396215 26/71 (37%)
zdhhc18bXP_009292400.1 DHHC 161..285 CDD:396215 26/74 (35%)

Return to query results.
Submit another query.