DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4676 and swf1

DIOPT Version :9

Sequence 1:NP_610853.1 Gene:CG4676 / 36465 FlyBaseID:FBgn0033815 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_596556.1 Gene:swf1 / 2539719 PomBaseID:SPBC13G1.07 Length:356 Species:Schizosaccharomyces pombe


Alignment Length:247 Identity:62/247 - (25%)
Similarity:99/247 - (40%) Gaps:56/247 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RSISDFACFL--LVAVFVPVTYIFHVTIVMPELFAIGGIWYTLLWLASLFLIFNITSNMLACMLV 75
            ||:|::..:.  .:.||:   |:..:||.:...|..|..      |...|.|.:..|.:.:.:|.
pombe    66 RSLSNYVLYKNNPLVVFL---YLALITIGIASFFIYGSS------LTQKFSIIDWISVLTSVLLP 121

  Fly    76 DTSIRKELLKPPLDAAQLARW----------------HSCQDCQTLVPPRSWHCEVCNVCVLKRD 124
            ..|:.......| ....|..|                :.|..|:...|.||.||.:||:||.|.|
pombe   122 YISLYIAAKSNP-GKIDLKNWNEASRRFPYDYKIFFPNKCSTCKFEKPARSKHCRLCNICVEKFD 185

  Fly   125 HHCRFTCCCIGHHNYRYFFYYLVYMIIGSLAAAIMESIYLWHLHLDIYWRWSTLFTIFAPVVSLM 189
            |||.:...|:|.:|.||||.:|:..|           ..|:|..|.:.:.::.|       ..:.
pombe   186 HHCIWINNCVGLNNARYFFLFLLCTI-----------QLLFHSILRLGYHFNAL-------RDMR 232

  Fly   190 LSPSW-ESFYLVIYDLTLLG--FAISSL-------LLVFHWSIFKSGSVTRE 231
            ..||: .|::..|.....||  |.||.:       ||.:.:.:..:|..|.|
pombe   233 QYPSFLRSWWFAIKSEGELGSVFLISLICSVLVLCLLGYEFFLVYAGYTTNE 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4676NP_610853.1 zf-DHHC 99..232 CDD:279823 43/143 (30%)
swf1NP_596556.1 COG5273 47..356 CDD:227598 62/247 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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