DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pex13 and pex13

DIOPT Version :9

Sequence 1:NP_610850.1 Gene:Pex13 / 36462 FlyBaseID:FBgn0033812 Length:440 Species:Drosophila melanogaster
Sequence 2:XP_002939552.1 Gene:pex13 / 733832 XenbaseID:XB-GENE-1013577 Length:401 Species:Xenopus tropicalis


Alignment Length:411 Identity:128/411 - (31%)
Similarity:191/411 - (46%) Gaps:89/411 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GGYP----PEAVLRTPYGNVRALPGP-----AQPPPLPQSPFQQT---------QQYGGFGSGYG 78
            ||.|    ..|.||   .|:...||.     ..||.||: |.|||         ..|..|...:|
 Frog    18 GGLPAPSYQSADLR---ANILTRPGQPTLTRVAPPVLPR-PSQQTGSTGLSTYRPAYNSFSPSFG 78

  Fly    79 GNNYGLGGYGGFNSGAFGYGGLGGFGSGLGSGFGSGYGYGGGYGGGYGGGFGGGYNRFGAMGEND 143
              :||...|||::..::||||                              ..|||||.|  |:.
 Frog    79 --SYGSSFYGGYSPYSYGYGG------------------------------ALGYNRFQA--EDI 109

  Fly   144 AEQRFIYMAESSSRPAFQSIESLVSAIGNIASMLDSTFFALTSSFRAILGVATNFVRLRSVFAQF 208
            ...||:..||.|||.|||||||:|.|..:::.|:|:||.|:.:||||:|.||.:|.|::..|...
 Frog   110 PPSRFVRQAEESSRGAFQSIESIVHAFSSVSMMMDATFSAVYNSFRAVLDVANHFSRMKVHFTNV 174

  Fly   209 WTTFAIFRGLNWMYRKILYWLRLSNLDPSSAAFKKAFAEALNE--NNGQARGAPNVPRKGNSPWP 271
            ::.||:.|.:.::||::...|.|.....:...:.::.....|.  .:|||..:.       ..||
 Frog   175 FSVFALVRTIRFLYRRLQRLLGLRKNSETEDLWSESAGTVANAGVKDGQATNSA-------KSWP 232

  Fly   272 VLAFISFIFTAPYLIMKLLGTVTNTAQEEARNP-AKWTA----PIQTQAVYEFVARSPSELSLRA 331
            :..|.:.|...||||.|||    :...||..|. ..|.:    .:..:|.|:|.|.|..|:|..|
 Frog   233 IFMFFAVILGGPYLIWKLL----SACNEEVNNENVNWASGEDDHVVGRAEYDFTAASEEEISFHA 293

  Fly   332 GQMLHVAPRDIQQTLNLLNTGWALATTNGQTSGIIPISYVKSPQQMR-------QEMQDQTKPAQ 389
            |.||::||::.|..:.    ||.|.:.:|||:|.:|.:||:...:.|       ::.|:|    |
 Frog   294 GDMLNLAPKEQQPKIR----GWLLGSVDGQTTGFVPANYVRILGKRRGRKAAGVEQRQEQ----Q 350

  Fly   390 PQPELMNLSAGAFASPPLEQQ 410
            |.|:..::..||.....||:|
 Frog   351 PVPDASSVPIGAAEVASLEEQ 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex13NP_610850.1 Peroxin-13_N 140..290 CDD:282008 52/151 (34%)
SH3_PEX13_eumet 312..373 CDD:212798 24/60 (40%)
pex13XP_002939552.1 Peroxin-13_N 113..251 CDD:367805 51/144 (35%)
SH3_PEX13_eumet 274..331 CDD:212798 24/60 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 91 1.000 Domainoid score I7612
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H1967
Inparanoid 1 1.050 165 1.000 Inparanoid score I4069
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1085263at2759
OrthoFinder 1 1.000 - - FOG0005709
OrthoInspector 1 1.000 - - oto102802
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1291
SonicParanoid 1 1.000 - - X5398
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

Return to query results.
Submit another query.