DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex13 and spata13

DIOPT Version :9

Sequence 1:NP_610850.1 Gene:Pex13 / 36462 FlyBaseID:FBgn0033812 Length:440 Species:Drosophila melanogaster
Sequence 2:XP_005162798.1 Gene:spata13 / 568426 ZFINID:ZDB-GENE-091116-25 Length:1251 Species:Danio rerio


Alignment Length:114 Identity:22/114 - (19%)
Similarity:47/114 - (41%) Gaps:29/114 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 IQTQAVYEFVARSPSELSLRAGQMLHVAPRDIQQTLNLLNTGWALATTNGQTSGIIPISYVKSPQ 375
            :..:|:::.|.....||:.:||:::.|.  |:|:.    :..|.:.   |......|.|:|:   
Zfish   747 VYAEALWDHVTMEEQELAFKAGEVIRVL--DVQEQ----DWWWGMV---GDREAWFPSSFVR--- 799

  Fly   376 QMRQEMQDQTKPAQPQPELMNLSAGAFASPPLEQQMNYDFNLAAQQQAP 424
             :|...:|.:            |....::|..|:.:..|    :.:|.|
Zfish   800 -VRVNQEDSS------------SESVESTPDTEEPIPSD----SHKQNP 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex13NP_610850.1 Peroxin-13_N 140..290 CDD:282008
SH3_PEX13_eumet 312..373 CDD:212798 14/60 (23%)
spata13XP_005162798.1 SH3 747..800 CDD:327375 14/65 (22%)
RhoGEF 841..1020 CDD:214619
PH_Collybistin_ASEF 1025..1163 CDD:269931
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1291
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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