DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex13 and pex13

DIOPT Version :9

Sequence 1:NP_610850.1 Gene:Pex13 / 36462 FlyBaseID:FBgn0033812 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_956939.1 Gene:pex13 / 393618 ZFINID:ZDB-GENE-040426-1544 Length:416 Species:Danio rerio


Alignment Length:413 Identity:139/413 - (33%)
Similarity:202/413 - (48%) Gaps:89/413 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 APLLPPSSSIG-VGVSSGGGYPPEAVLRTPYGNVRALPGPAQPPPLPQSPFQQTQQ--YGGFGSG 76
            |||...|:..| |..|...|..|..:.|.             .||:|..|.:|:.:  |..|.|.
Zfish    19 APLNYRSTDFGSVSQSGPSGSGPPVLTRV-------------VPPIPPRPVRQSYRPTYSSFPSS 70

  Fly    77 YGGNNYGLGGYGGFNSGAFGYGGLGGFGSGLGSGFGSGYGYGGGYGGGYGGGFGGGYNRFGAMGE 141
            |  :.||...|||::..::                 ||||.|||.          |||||..|.|
Zfish    71 Y--SPYGNSMYGGYSPYSY-----------------SGYGVGGGL----------GYNRFNTMDE 106

  Fly   142 NDAEQRFIYMAESSSRPAFQSIESLVSAIGNIASMLDSTFFALTSSFRAILGVATNFVRLRSVFA 206
             ....||:..||.|||.|||||||:|.|..:::.|:|:||.|:.:||||:|.||.:|.|||..|.
Zfish   107 -IPPSRFVQQAEESSRGAFQSIESIVHAFSSVSMMMDATFSAVYNSFRAVLDVANHFSRLRIHFT 170

  Fly   207 QFWTTFAIFRGLNWMYRKI--LYWLR----LSNLDPSSAAFKKAFAEALNENNGQARGA----PN 261
            :..:.||:.|.|.::||::  |..||    :.:|...|||.....:.:      .||||    |.
Zfish   171 KVLSAFALVRTLRYLYRRLQRLMGLRQGSEVDDLWADSAASSSVVSAS------GARGAGVEEPG 229

  Fly   262 VPRKGNS--PWPVLAFISFIFTAPYLIMKLLGTVTNTAQEEARNPAKWTA----PIQTQAVYEFV 320
            |    ||  .||:..|.:.:...||||.:||.:... |:|.|.|   |.:    .:..:..|:|.
Zfish   230 V----NSVKSWPIFLFFAVVLGGPYLIWRLLSSAEG-AEENATN---WASGEDDHVVARVEYDFT 286

  Fly   321 ARSPSELSLRAGQMLHVAPRDIQQTLNLLNTGWALATTNGQTSGIIPISYVKSPQQMR------- 378
            |.|..|:|::||.||::||::.|..:.    ||.||:.:|||:|::|.:|||...:.|       
Zfish   287 AASEEEISVQAGDMLNLAPKEQQPRVR----GWLLASVDGQTTGLVPANYVKVLGRRRGRKHAEL 347

  Fly   379 QEMQDQTKPAQ--PQPELMNLSA 399
            :.|....:|||  |.|:...::|
Zfish   348 ERMAQAQEPAQNLPAPQTALITA 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex13NP_610850.1 Peroxin-13_N 140..290 CDD:282008 62/161 (39%)
SH3_PEX13_eumet 312..373 CDD:212798 24/60 (40%)
pex13NP_956939.1 Peroxin-13_N 108..256 CDD:282008 61/157 (39%)
SH3_PEX13_eumet 278..335 CDD:212798 24/60 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579499
Domainoid 1 1.000 94 1.000 Domainoid score I7462
eggNOG 1 0.900 - - E1_KOG3875
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1967
Inparanoid 1 1.050 173 1.000 Inparanoid score I4073
OMA 1 1.010 - - QHG46446
OrthoDB 1 1.010 - - D1085263at2759
OrthoFinder 1 1.000 - - FOG0005709
OrthoInspector 1 1.000 - - oto41190
orthoMCL 1 0.900 - - OOG6_105516
Panther 1 1.100 - - LDO PTHR19332
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1291
SonicParanoid 1 1.000 - - X5398
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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