DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex13 and pex13

DIOPT Version :9

Sequence 1:NP_610850.1 Gene:Pex13 / 36462 FlyBaseID:FBgn0033812 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_593611.1 Gene:pex13 / 2543046 PomBaseID:SPAC3C7.10 Length:288 Species:Schizosaccharomyces pombe


Alignment Length:350 Identity:80/350 - (22%)
Similarity:124/350 - (35%) Gaps:113/350 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PPLPQSPFQQTQQYGGFGSGYGGN----------------------NYGLGGYGGFNSGAFGYGG 99
            |.||..|      .||..|....|                      |.|...|.||||       
pombe    10 PSLPSYP------AGGIMSVSNSNADTNQGVTQHPLANRIVNPNYYNMGFNPYSGFNS------- 61

  Fly   100 LGGFGSGLGSGFGSGYGYGGGYGGGYGGGFGGGYNRFGAMGENDAEQRFIYMAESSSRPAFQSIE 164
                                         |...:|.|..:..|        :..:....:.|.||
pombe    62 -----------------------------FIPSFNPFVPLETN--------LPGNGPISSLQVIE 89

  Fly   165 SLVSAIGNIASMLDSTFFALTSSFRAILGVATNFVRLRSVFAQFWTTFAIFRGLNWMYRKILYWL 229
            |:|.|:|:||.:|:||..|...|:...:.|:.|..:|:|   .....|.|...|:.:.|.:|.:.
pombe    90 SIVGAVGSIAQVLESTLMAAHMSYNTFVSVSENLNKLKS---SIGAIFGIVSLLSRLKRLVLKFF 151

  Fly   230 RLSNLDPSSAAFKKAFAEALNENNGQARGAPNVPRKGNSPWPV---LAFISFIFTAPYLIMKLLG 291
            :.|.:|..::.....|.:  .|.|.:           ||.:.:   ||.|..:...||.|::|..
pombe   152 KHSKIDEMNSQEYDVFEK--EEGNHK-----------NSIYSIVSSLAIILGLVGLPYAIIRLFK 203

  Fly   292 TVTNTAQEEARNPAKWTAPIQT----QAVYEFVARSPS-ELSLRAGQMLHVAPRDIQQTLNLLNT 351
            .:..  :|:....||....|.:    :|.|||::|.|. |:||:.|        ||...|:..:|
pombe   204 NIYE--KEKQIQQAKIRKKIDSLEFCKADYEFMSRDPGVEMSLKKG--------DIIAILSKTDT 258

  Fly   352 ------GWALATTNGQTSGIIPISY 370
                  .|.....:|:| |..|.:|
pombe   259 QGNPCEWWQGRKRSGET-GWFPSNY 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex13NP_610850.1 Peroxin-13_N 140..290 CDD:282008 37/152 (24%)
SH3_PEX13_eumet 312..373 CDD:212798 19/69 (28%)
pex13NP_593611.1 Peroxin-13_N 86..202 CDD:282008 36/131 (27%)
SH3_Pex13p_fungal 226..285 CDD:212705 19/65 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 42 1.000 Domainoid score I3677
eggNOG 1 0.900 - - E1_KOG3875
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005709
OrthoInspector 1 1.000 - - oto100740
orthoMCL 1 0.900 - - OOG6_105516
Panther 1 1.100 - - LDO PTHR19332
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1291
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.840

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