DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex13 and Plekhg1

DIOPT Version :9

Sequence 1:NP_610850.1 Gene:Pex13 / 36462 FlyBaseID:FBgn0033812 Length:440 Species:Drosophila melanogaster
Sequence 2:XP_006512502.1 Gene:Plekhg1 / 213783 MGIID:2676551 Length:1487 Species:Mus musculus


Alignment Length:166 Identity:35/166 - (21%)
Similarity:57/166 - (34%) Gaps:42/166 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 PWPVLAFISFIFTAPYLIMKLLGTVTNTAQEE-------------------ARNPAKWTAPIQTQ 314
            |...|:|..|.:..|    ||..||...:|::                   |:.|||     ..|
Mouse   472 PKEPLSFSVFHYKNP----KLQHTVQAKSQQDKRLWVLHLKRLILEN
HAAAAKIPAK-----AKQ 527

  Fly   315 AVYEFVA-------RSP-SELSLRAGQMLHVAPRDIQQTLNLLNTGWALATTNGQTSGIIPISYV 371
            |:.|..|       .|| .|:....|.    ||..:::.....:....:..|:..:..|..:|..
Mouse   528 AILEMDAIHYPGFCYSPEGEMKTPCGS----APHRLRRKSEPSSRSHKVLKTSETSQDIQKVSRE 588

  Fly   372 KSPQQMRQEMQDQTKPAQPQPELMNL--SAGAFASP 405
            :||.|:...:..|.........::|:  ..|...||
Mouse   589 ESPSQLTSAVPAQRNCQPGSAAVINMLRGGGGVRSP 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex13NP_610850.1 Peroxin-13_N 140..290 CDD:282008 6/20 (30%)
SH3_PEX13_eumet 312..373 CDD:212798 13/68 (19%)
Plekhg1XP_006512502.1 RhoGEF 211..387 CDD:238091
PH_PLEKHG1_G2_G3 369..514 CDD:270063 10/45 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1291
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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