DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex13 and prx-13

DIOPT Version :9

Sequence 1:NP_610850.1 Gene:Pex13 / 36462 FlyBaseID:FBgn0033812 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_495513.1 Gene:prx-13 / 174192 WormBaseID:WBGene00004198 Length:330 Species:Caenorhabditis elegans


Alignment Length:369 Identity:129/369 - (34%)
Similarity:176/369 - (47%) Gaps:63/369 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PGPAQPPPLPQSPFQQTQQYGGFGSGYGGNNYGLGGYGGFNSGAFGYGGLGGFGSGLGSGFGSG- 114
            |...||||||...|..........:|                  |||||    |.|:.:..||| 
 Worm     4 PPTNQPPPLPPRSFDNQMSNPMINTG------------------FGYGG----GYGMNTFPGSGM 46

  Fly   115 YGYGGGYGGGYG-GGFGGGYNRFGAMGENDAEQRFIYMAESSSRPAFQSIESLVSAIGNIASMLD 178
            ||.||.||||.| ||||||:|..| .|:. .:..|..:||..||.|||||||:|:|:.::|:||:
 Worm    47 YGGGGMYGGGMGYGGFGGGFNHMG-YGQG-PDSNFARLAEEQSRGAFQSIESVVNAVSSVANMLN 109

  Fly   179 STFFALTSSFRAILGVATNFVRLRSVFAQFWTTFAIFRGLNWMYRKILYWLRLSNLDPSSAAFKK 243
            ||..|:.|||||::||...|.||::..:....:.|:||   |:||...:.|.:..|.|:|.|...
 Worm   110 STHNAVYSSFRAVIGVVEQFGRLKTQLSSVVVSLAVFR---WVYRFWRWLLVMLKLKPASYASAA 171

  Fly   244 AFAEALNENNG-QARGAPNVPRKGNSPWPVLAFISFIFTAPYLIMKLLGTVTNTAQEEARNPAKW 307
            ..|...::... ...||...|...|  ||...|.......|:||.:.:..:...| ||.|..|..
 Worm   172 EMAWGTSQPYATDVLGATRTPASVN--WPAALFWVVAIGGPWLIYRCVSQMVQAA-EEKRKWATG 233

  Fly   308 TAPIQT-QAVYEFVARSPSELSLRAGQMLHVAPRDIQQTLNLLNTGWALAT-TNGQTSGIIPISY 370
            .||..| ||:::|.|.:..|||...|:.|.|||::.|..:.    ||.||: .:|...|::||:|
 Worm   234 AAPHYTAQALFDFQASNEQELSFMNGETLRVAPKEEQPRVR----GWLLASVADGSRIGLVPINY 294

  Fly   371 VKSPQQMRQEMQDQTKPAQPQPELMNLSAGAFASPPLEQQMNYD 414
            |:...:..|                        ||||.||.|.|
 Worm   295 VRIVGKQSQ------------------------SPPLTQQSNLD 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex13NP_610850.1 Peroxin-13_N 140..290 CDD:282008 53/150 (35%)
SH3_PEX13_eumet 312..373 CDD:212798 24/62 (39%)
prx-13NP_495513.1 Peroxin-13_N 70..217 CDD:282008 54/153 (35%)
SH3_PEX13_eumet 239..297 CDD:212798 24/61 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158762
Domainoid 1 1.000 80 1.000 Domainoid score I5567
eggNOG 1 0.900 - - E1_KOG3875
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1967
Inparanoid 1 1.050 165 1.000 Inparanoid score I2814
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46446
OrthoDB 1 1.010 - - D1085263at2759
OrthoFinder 1 1.000 - - FOG0005709
OrthoInspector 1 1.000 - - oto20457
orthoMCL 1 0.900 - - OOG6_105516
Panther 1 1.100 - - LDO PTHR19332
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1291
SonicParanoid 1 1.000 - - X5398
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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