DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dp and tfdp1a

DIOPT Version :9

Sequence 1:NP_477039.1 Gene:Dp / 36461 FlyBaseID:FBgn0011763 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_998657.1 Gene:tfdp1a / 406813 ZFINID:ZDB-GENE-040426-2883 Length:409 Species:Danio rerio


Alignment Length:358 Identity:163/358 - (45%)
Similarity:212/358 - (59%) Gaps:39/358 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 GDRYVKFTPNPI----KMKSKLHAIQSNSLHSMSASS------------SSVQRKRKPDKAGKGL 170
            |...|...|:.:    :..|..:.|..||.|:.|:..            ||.:|.:|.:|.||||
Zfish    51 GPSNVNIAPHMVISTPQRPSGSNVILMNSPHTPSSQFITQSQPSEASPWSSGKRGKKGEKNGKGL 115

  Fly   171 RHFSMKVCEKVEEKGKTTYNEVADDLVSE--EMKNNAYDNNC---DQKNIRRRVYDALNVLMAIN 230
            |||||||||||:.||.||||||||:||:|  ...|:...|:.   ||||||||||||||||||:|
Zfish   116 RHFSMKVCEKVQRKGVTTYNEVADELVAEFSSGDNHISPNDAHVYDQKNIRRRVYDALNVLMAMN 180

  Fly   231 VISKDKKEIRWIGLPANSTETFLALEEENCQRRERIKQKNEMLREMIMQHVAFKGLVERNKRNES 295
            :|||:||||:|||||.||.:....||.|..:|.||||||...|:|:|:|.:|||.||:||::.|.
Zfish   181 IISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRQREQ 245

  Fly   296 QGVVPSP-NASIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTFEMHDDIEVLKRMGFLLGLD 359
            |...|.| |:.|.||||||||.|.|.|:||::|||.||:|.||..||:|||||||||||...||:
Zfish   246 QTKRPPPANSVIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDSMFEIHDDIEVLKRMGMACGLE 310

  Fly   360 KGECTPENIERVKSWVPPNLAKYV---------EAYGTGKTGEN---MYESDDEDNEFNGYLESA 412
            .|:|:.|:::..:|.||..|..||         ..|.||.:..|   .|....:.........|:
Zfish   311 VGKCSAEDLKTARSLVPKALEPYVTEMAQGPISNVYMTGASSANGGGRYHVGGDSGADATMASSS 375

  Fly   413 NESQGFAQHSAQHTTDGEFKLEMDDDELDDDID 445
            |:|     |.:....:.......:||:.||:.|
Zfish   376 NDS-----HYSGSRVETPVSYMGEDDDDDDEFD 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DpNP_477039.1 E2F_TDP 167..243 CDD:280479 57/80 (71%)
coiled coil 248..294 CDD:271217 22/45 (49%)
DP 255..388 CDD:285934 73/142 (51%)
tfdp1aNP_998657.1 E2F_TDP 115..193 CDD:280479 54/77 (70%)
coiled coil 198..244 CDD:271217 22/45 (49%)
DP 200..339 CDD:285934 72/138 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573599
Domainoid 1 1.000 144 1.000 Domainoid score I4552
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 271 1.000 Inparanoid score I2969
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1046304at2759
OrthoFinder 1 1.000 - - FOG0002399
OrthoInspector 1 1.000 - - otm25752
orthoMCL 1 0.900 - - OOG6_102647
Panther 1 1.100 - - O PTHR12548
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2839
SonicParanoid 1 1.000 - - X1414
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.890

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