DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dp and tfdp1b

DIOPT Version :9

Sequence 1:NP_477039.1 Gene:Dp / 36461 FlyBaseID:FBgn0011763 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_957070.2 Gene:tfdp1b / 393749 ZFINID:ZDB-GENE-040426-1746 Length:385 Species:Danio rerio


Alignment Length:373 Identity:162/373 - (43%)
Similarity:212/373 - (56%) Gaps:57/373 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 IPKTEAGTTYTTVSAQKTSGAGSGHYDLPLKGDRYVKFTPN----PIKMKSKLHAIQSNSLHSMS 151
            :|||      .||         :|.:.||    ..|..||.    |:.:.|. |...:.:....|
Zfish    46 LPKT------LTV---------TGAHVLP----HMVVSTPQRPTIPVLLTSP-HTPTAQTQQESS 90

  Fly   152 ASSSSVQRKRKPDKAGKGLRHFSMKVCEKVEEKGKTTYNEVADDLVSE-------EMKNNAYDNN 209
            ..||.  ..|:.||:|||||||||||||||::|..|:||||||:||.|       .:..|...::
Zfish    91 PWSSG--HCRRADKSGKGLRHFSMKVCEKVQKKVVTSYNEVADELVQEFSSADHSSISPNDAVSS 153

  Fly   210 C---DQKNIRRRVYDALNVLMAINVISKDKKEIRWIGLPANSTETFLALEEENCQRRERIKQKNE 271
            |   ||||||||||||||||||:|:||||||||:|||.|.||.:....|:.|..:|:||||||..
Zfish   154 CHVYDQKNIRRRVYDALNVLMAMNIISKDKKEIKWIGFPTNSAQECEDLKAERQRRQERIKQKQS 218

  Fly   272 MLREMIMQHVAFKGLVERNKRNESQGV-VPSPNASIQLPFIIVNTHKSTKINCSVTNDKSEYIFK 335
            .|:|:|:|.:|||.||:||:..|.|.. .||.|..|||||||:||.|.|.|:||::|||.||:|.
Zfish   219 QLQELIVQQIAFKNLVQRNREVEQQSKRSPSANTIIQLPFIIINTSKKTIIDCSISNDKFEYLFN 283

  Fly   336 FDKTFEMHDDIEVLKRMGFLLGLDKGECTPENIERVKSWVPPNLAKYVEAYGTGKTGENMYESDD 400
            ||..||:|||:|||||:|..|||:.|.|:.|.::...|.|...|..||.....|...:.|     
Zfish   284 FDSMFEIHDDVEVLKRLGLALGLESGRCSAEQMKIATSLVSKALQPYVTEMAQGSVNQPM----- 343

  Fly   401 EDNEFNGYLESANESQGFAQHSAQHTTDGEFKLE---MDDDELDDDID 445
               :|         |...|:..|..:|....:..   |::||.|::.|
Zfish   344 ---DF---------SHVAAERRASSSTSSRVETPTSLMEEDEEDEEED 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DpNP_477039.1 E2F_TDP 167..243 CDD:280479 56/85 (66%)
coiled coil 248..294 CDD:271217 21/45 (47%)
DP 255..388 CDD:285934 69/133 (52%)
tfdp1bNP_957070.2 E2F_TDP 104..190 CDD:280479 56/85 (66%)
coiled coil 195..241 CDD:271217 21/45 (47%)
DP 197..336 CDD:285934 69/138 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573598
Domainoid 1 1.000 144 1.000 Domainoid score I4552
eggNOG 1 0.900 - - E1_KOG2829
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 271 1.000 Inparanoid score I2969
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1046304at2759
OrthoFinder 1 1.000 - - FOG0002399
OrthoInspector 1 1.000 - - otm25752
orthoMCL 1 0.900 - - OOG6_102647
Panther 1 1.100 - - O PTHR12548
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1414
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.760

Return to query results.
Submit another query.