DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dp and Tfdp2

DIOPT Version :9

Sequence 1:NP_477039.1 Gene:Dp / 36461 FlyBaseID:FBgn0011763 Length:445 Species:Drosophila melanogaster
Sequence 2:XP_006243618.1 Gene:Tfdp2 / 300947 RGDID:1305814 Length:447 Species:Rattus norvegicus


Alignment Length:402 Identity:169/402 - (42%)
Similarity:229/402 - (56%) Gaps:58/402 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 IPKT------EAGTTYTTVSAQKTSGAGSGHYDLPLKGDRYVKFTPNPIKMKSKLHAIQS----- 144
            :|||      ..|......:.|:.:.:||     .|.|..|   ||.| .|.::.|..::     
  Rat    47 LPKTLGPVNVNVGPQMIISTPQRITNSGS-----VLIGSPY---TPAP-AMVTQTHIAEAAGWVP 102

  Fly   145 ----NSLHSMSASSSSVQRKRKPDKAGKGLRHFSMKVCEKVEEKGKTTYNEVADDLVSE--EMKN 203
                .:...:.:..|..:|.:|.||.|||||||||||||||:.||.|:||||||:||||  ...|
  Rat   103 SDRKRAREFIDSDFSESKRSKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNASN 167

  Fly   204 N-AYDNNC-DQKNIRRRVYDALNVLMAINVISKDKKEIRWIGLPANSTETFLALEEENCQRRERI 266
            : |.|:.. ||||||||||||||||||:|:|||:||||:|||||.||.:....||.|..:|.|||
  Rat   168 HLAADSQAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERI 232

  Fly   267 KQKNEMLREMIMQHVAFKGLVERNKRNESQGV-VPSPNASIQLPFIIVNTHKSTKINCSVTNDKS 330
            |||...|:|:::|.:|||.||:||::||.|.. .|:.|::||||||::||.:.|.|:||:::||.
  Rat   233 KQKRAQLQELLLQQIAFKNLVQRNRQNEQQNQGPPAVNSTIQLPFIVINTSRKTVIDCSISSDKF 297

  Fly   331 EYIFKFDKTFEMHDDIEVLKRMGFLLGLDKGECTPENIERVKSWVPPNLAKYVEAYGTG------ 389
            ||:|.||.|||:|||||||||||...||:.|:|:.|:::..||.||..|..|:....||      
  Rat   298 EYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCSLEDLKIAKSLVPKALEGYITDVSTGPSWLNQ 362

  Fly   390 ---------------KTGENMYES--------DDEDNEFNGYLESANESQGFAQHSAQHTTDGEF 431
                           .||..:.:|        |.|.....|...:.|..|.....|....:.||.
  Rat   363 GLLLNSTQSVSNLDPTTGATVPQSSVNQGLCLDAEVALATGQFLAPNSHQSSTAASQFSESRGET 427

  Fly   432 KLEMDDDELDDD 443
            ....:|:|.:|:
  Rat   428 PCSFNDEEEEDE 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DpNP_477039.1 E2F_TDP 167..243 CDD:280479 58/79 (73%)
coiled coil 248..294 CDD:271217 21/45 (47%)
DP 255..388 CDD:285934 69/133 (52%)
Tfdp2XP_006243618.1 E2F_TDP 129..209 CDD:396755 58/79 (73%)
coiled coil 214..260 CDD:271217 21/45 (47%)
DP 216..354 CDD:400917 69/137 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334525
Domainoid 1 1.000 145 1.000 Domainoid score I4460
eggNOG 1 0.900 - - E1_KOG2829
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 275 1.000 Inparanoid score I2884
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1046304at2759
OrthoFinder 1 1.000 - - FOG0002399
OrthoInspector 1 1.000 - - otm45543
orthoMCL 1 0.900 - - OOG6_102647
Panther 1 1.100 - - LDO PTHR12548
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1414
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.800

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