DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dp and dpl-1

DIOPT Version :9

Sequence 1:NP_477039.1 Gene:Dp / 36461 FlyBaseID:FBgn0011763 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_495957.1 Gene:dpl-1 / 174458 WormBaseID:WBGene00001061 Length:598 Species:Caenorhabditis elegans


Alignment Length:304 Identity:128/304 - (42%)
Similarity:181/304 - (59%) Gaps:19/304 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 ASSSSVQRKRKPDKAGKGLRHFSMKVCEKVEEKGKTTYNEVADDLVSEEMKNN------AYDNNC 210
            :|.:..|:..||    .||||||.||||||:|||.|.||||||:||::..:||      ......
 Worm    59 SSGAGGQQSDKP----TGLRHFSTKVCEKVKEKGLTNYNEVADELVADYFQNNLIKQIDVVKQEY 119

  Fly   211 DQKNIRRRVYDALNVLMAINVISKDKKEIRWIGLPANSTETFLALEEENCQRRERIKQKNEMLRE 275
            |.||||||||||||||:|:|:|:|.||:||||||||::::....||||..:|...|..|.:.|.|
 Worm   120 DMKNIRRRVYDALNVLLAMNIITKSKKDIRWIGLPASASQEISRLEEEKSRREASISSKKQALEE 184

  Fly   276 MIMQHVAFKGLVERNKRNESQGVVPSPNASIQLPFIIVNTHKSTKINCSVTNDKSEYIFKFDKTF 340
            |::|.|::|.|||||::||.:...|..:..:.|||:|:||.|...:.|||::||||::|.|||.|
 Worm   185 MVLQIVSYKNLVERNRKNEHKNGRPENDTVLHLPFLIINTDKEANVECSVSSDKSEFLFSFDKKF 249

  Fly   341 EMHDDIEVLKRMGFLLGLDKGECTPENIERVKSWVPPNLAKYV-EAYGTGKTGENMYESDDEDNE 404
            |:|||.|:||::.....|:....|.|.::..||::|.....|| |.....|..|...|...:..:
 Worm   250 EIHDDFEILKKLNLACSLETTNPTAEEVKTAKSFLPTLHQHYVDEIIANRKKVEAEKEEKRKQQQ 314

  Fly   405 FNGYLESANESQGFAQH------SAQHTTDGEFKLEMDDDELDD 442
            ......|.|.||  ||:      .||.:....|..::.:..::|
 Worm   315 LIADQMSMNLSQ--AQYVEPTSSLAQMSYSSRFNRQLQEHLIND 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DpNP_477039.1 E2F_TDP 167..243 CDD:280479 50/81 (62%)
coiled coil 248..294 CDD:271217 18/45 (40%)
DP 255..388 CDD:285934 56/133 (42%)
dpl-1NP_495957.1 E2F_TDP 71..152 CDD:280479 50/80 (63%)
coiled coil 158..203 CDD:271217 18/44 (41%)
DP 159..296 CDD:285934 56/136 (41%)
YppG 455..>521 CDD:290883
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167162
Domainoid 1 1.000 120 1.000 Domainoid score I3583
eggNOG 1 0.900 - - E1_KOG2829
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002399
OrthoInspector 1 1.000 - - oto19262
orthoMCL 1 0.900 - - OOG6_102647
Panther 1 1.100 - - LDO PTHR12548
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2839
SonicParanoid 1 1.000 - - X1414
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.770

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