DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dp and Dp

DIOPT Version :10

Sequence 1:NP_477039.1 Gene:Dp / 36461 FlyBaseID:FBgn0011763 Length:445 Species:Drosophila melanogaster
Sequence 2:XP_309901.3 Gene:Dp / 1271158 VectorBaseID:AGAMI1_005642 Length:584 Species:Anopheles gambiae


Alignment Length:375 Identity:162/375 - (43%)
Similarity:235/375 - (62%) Gaps:44/375 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 IPKTEAGTTYTTVSAQKTSGAGSGHYDLPLKGDRYVKFTPNPIKMKSKLHAIQSN--------SL 147
            |...|.|.|.....::..:.:|:   |.|    .|::     :...|.:.::|||        ..
Mosquito   228 IVSLEKGVTKIATISKSYNESGN---DSP----PYLQ-----LSCASAVKSLQSNHSYKDHQQQQ 280

  Fly   148 HSMSASSSSVQ------RKRKPDKAGKGLRHFSMKVCEKVEEKGKTTYNEVADDLVSEEMKNN-- 204
            ||.|..:|:.|      |::|.||||:|||||||||||||:.||.|||||||::||:||.:|:  
Mosquito   281 HSYSKKTSTSQIHTPASRRQKADKAGRGLRHFSMKVCEKVKAKGTTTYNEVANELVAEETQNHNQ 345

  Fly   205 -AYDNNCDQKNIRRRVYDALNVLMAINVISKDKKEIRWIGLP-ANSTETFLALEEENCQRRERIK 267
             ......||||||||||||||||||:.:|||:||||||.||| :|:.:....||:||.:.|.||:
Mosquito   346 GVDPGTYDQKNIRRRVYDALNVLMAMKIISKEKKEIRWHGLPTSNTLQECEELEKENEKARRRIE 410

  Fly   268 QKNEMLREMIMQHVAFKGLVERNKRNESQGVVPSPNASIQLPFIIVNTHKSTKINCSVTNDKSEY 332
            .|.:.|.:::.||||.|.|:.|||.||.:|::|:||:::|||||||||.:.:.|||:::||||||
Mosquito   411 IKQQQLLDLVQQHVALKSLIARNKANEERGLIPNPNSAVQLPFIIVNTDRKSNINCNISNDKSEY 475

  Fly   333 IFKFDKTFEMHDDIEVLKRMGFLLGLDKGECTPENIERVKSWVPPNLAKYVEAYGTGKTGENMYE 397
            .|||:.:||:|||:::|||:|..|.|:||..:..:::::||.||..:.||::|||.|      :|
Mosquito   476 SFKFEDSFEIHDDVQILKRIGLSLALEKGHYSETDLKKIKSMVPKAVEKYIDAYGLG------FE 534

  Fly   398 SDDEDN-EFNGYLESANESQGFAQH---SAQHTT----DGEFKLEMDDDE 439
            .||.|: |.:......:.....:..   :...||    |.|.|.|.|:|:
Mosquito   535 QDDVDDWEMSSLYNGPDNDDSLSTQDMLAFNDTTNDMLDDEMKFEDDEDD 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DpNP_477039.1 E2F_TDP 167..243 CDD:460530 55/78 (71%)
coiled coil 248..294 CDD:271217 18/45 (40%)
DP 255..386 CDD:462601 64/130 (49%)
DpXP_309901.3 E2F_TDP 306..385 CDD:460530 57/82 (70%)
DP 404..529 CDD:462601 61/124 (49%)

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