DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fsn and spsb1

DIOPT Version :9

Sequence 1:NP_610849.1 Gene:Fsn / 36460 FlyBaseID:FBgn0043010 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001020631.1 Gene:spsb1 / 334190 ZFINID:ZDB-GENE-030131-6122 Length:273 Species:Danio rerio


Alignment Length:206 Identity:86/206 - (41%)
Similarity:127/206 - (61%) Gaps:12/206 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 KLPKESL------KSDLLASVSTYKTKLRAYFHAWSPNDCSRNVYIK-PNGFTLHRNPVAQSTDA 112
            ||..::|      :.|:|..:.:....::.. |:|:.:|.|.|:::| .|....||:||||||||
Zfish    23 KLELQALDYTKPSRLDMLLDMPSASQDIQVQ-HSWNNDDRSLNIFVKEDNKLIFHRHPVAQSTDA 86

  Fly   113 ARGKIGFRHGRHTWEVIWE-GPLGTVAVIGISTKEAALQCHGYVALLGSDDQSWGWNLVENHLLH 176
            .||::|:..|.|.||:.|. ...||.||:|::|.||.|...||.||:|::.:||||:|..|.|.|
Zfish    87 IRGRVGYTRGLHVWEISWAMRQRGTHAVVGVATGEAPLHSVGYTALVGNNSESWGWDLGRNKLYH 151

  Fly   177 NGDMQGS--YP-LLNNAPKYQVGERIRVILDCEDNTLSFEKNYEFLGVAFRGLPDKKLYPTVSAV 238
            :|..|.|  || .|.....:.|.:...|:||.::.||||..:.::||||||||..|||||.||||
Zfish   152 DGKNQPSRTYPAFLEPDETFIVPDSFLVVLDMDEGTLSFIVDGQYLGVAFRGLKGKKLYPVVSAV 216

  Fly   239 YGNTEVSMVYL 249
            :|:.|:.:.|:
Zfish   217 WGHCEIRIRYI 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FsnNP_610849.1 F-box-like 13..54 CDD:289689
SPRY_Fbox 81..255 CDD:293964 81/174 (47%)
spsb1NP_001020631.1 SPRY_SOCS1-2-4 54..227 CDD:293963 80/172 (47%)
SOCS_SSB1_4 232..273 CDD:239688
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3953
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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