DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fsn and fsn-1

DIOPT Version :9

Sequence 1:NP_610849.1 Gene:Fsn / 36460 FlyBaseID:FBgn0043010 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_498046.1 Gene:fsn-1 / 175667 WormBaseID:WBGene00001499 Length:332 Species:Caenorhabditis elegans


Alignment Length:245 Identity:141/245 - (57%)
Similarity:179/245 - (73%) Gaps:3/245 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VLEVIFSYLELDDLSHCSQVCKSWYHFLNDENSDVWRWHCLNKLPKESLKSD--LLASVSTYKTK 75
            ||..||.||.|.||......|.||.:.|:.|:||:|::....||| |:..||  |||.:.:.|.|
 Worm    89 VLNQIFQYLPLKDLRSAMLTCHSWNNALSMEDSDIWQYLLGKKLP-EAAVSDPFLLAELGSAKKK 152

  Fly    76 LRAYFHAWSPNDCSRNVYIKPNGFTLHRNPVAQSTDAARGKIGFRHGRHTWEVIWEGPLGTVAVI 140
            |||::.||:.:|.|||.||:.||||:||.|||||||..|||.|...|.|.:::.|:||||||||:
 Worm   153 LRAWYFAWNTSDISRNNYIRTNGFTVHRQPVAQSTDGVRGKRGISKGVHAFDITWDGPLGTVAVV 217

  Fly   141 GISTKEAALQCHGYVALLGSDDQSWGWNLVENHLLHNGDMQGSYPLLNNAPKYQVGERIRVILDC 205
            ||:||.|||.|.||||||||||||||||||:|.|:|||...|.||.:||.|||:||::||:|:||
 Worm   218 GIATKHAALHCVGYVALLGSDDQSWGWNLVDNVLMHNGAQLGVYPKMNNPPKYEVGDKIRLIIDC 282

  Fly   206 EDNTLSFEKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLGTPLDG 255
            :.:...||:|.||||:||..:|..:|||.|.||||||||:|||:|:|..|
 Worm   283 DTHVAYFERNSEFLGIAFNHIPPLRLYPAVCAVYGNTEVTMVYVGSPQMG 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FsnNP_610849.1 F-box-like 13..54 CDD:289689 17/40 (43%)
SPRY_Fbox 81..255 CDD:293964 109/173 (63%)
fsn-1NP_498046.1 F-box 83..127 CDD:279040 17/37 (46%)
SPRY_Fbox 158..332 CDD:293964 109/173 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166632
Domainoid 1 1.000 178 1.000 Domainoid score I2143
eggNOG 1 0.900 - - E1_KOG3953
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14713
Inparanoid 1 1.050 291 1.000 Inparanoid score I1691
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45658
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007019
OrthoInspector 1 1.000 - - oto18349
orthoMCL 1 0.900 - - OOG6_107936
Panther 1 1.100 - - LDO PTHR12245
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2525
SonicParanoid 1 1.000 - - X5114
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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