DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4630 and OCT4

DIOPT Version :9

Sequence 1:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster
Sequence 2:NP_188702.2 Gene:OCT4 / 821613 AraportID:AT3G20660 Length:526 Species:Arabidopsis thaliana


Alignment Length:572 Identity:159/572 - (27%)
Similarity:267/572 - (46%) Gaps:106/572 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LDFDDILVE-IGEFGRFQRRNYLLICLPVLFAAANSLSYVFTAGSPTYRCYVPECDKLVDAEYGA 76
            |..|::|.. .|||||:|.::::|.|:.....|.:::..:|....|.:||...:|.         
plant    32 LCIDEMLQRYCGEFGRWQLKHFVLTCIAWALEAFHTMVMIFADQEPEWRCVGSDCR--------- 87

  Fly    77 NWVSIAVPGSWSKRGHFTPSTCERFVANGDHLESSSDPWSAWPLDQCFAENFTTETERCNQFVYG 141
                   .||.:         ||        |:.||..|:|..                     |
plant    88 -------VGSLN---------CE--------LDPSSWEWTAGK---------------------G 107

  Fly   142 SSERTIVQQWGLQCPENLWKLAFVGTIHFAGLVVGTALSGYLAD-RYGRKHIFLFCIVFMALTGV 205
            ||   .|.:|||.|.:. :|:..|..:.|||.::|..:.|:|:| :.|||.......:..|:.|:
plant   108 SS---TVSEWGLICGDK-YKVGLVQALFFAGCMIGAGVFGHLSDSKLGRKGSLTVVCIINAIFGI 168

  Fly   206 AQALSWDYISFLFFALLNAVGTSGVYPLAFIIGVEMVGPRKREMSSIVLNYFYAVGEALL-GLSV 269
            |.|.|.:|.:::....|....|.||...||::..|.:||.||.::.:...||::.|.|:| |::.
plant   169 ATAFSPNYWTYVVLRFLTGFSTGGVGLTAFVLATEPIGPSKRGVAGMSTFYFFSAGIAVLSGIAY 233

  Fly   270 FLPDWRQLQLALSVPPLICVAYFWL-----VPESVRWLLARNRREQAGVIIRRAAKVNRRDISVE 329
            ....||:|.:..|:|.|:    |.|     :.||.||.|.|.:.::|..::...||.|.|.|...
plant   234 VFRSWRELFIVSSLPSLL----FLLIVIPFISESPRWYLVRGKVDEAMKLMHSIAKTNGRHIPAG 294

  Fly   330 LMASFKQQELDAETGQEDDVEGGLHVKKDDKIWLAVKEVARSHILMGRYAILLLIWAVNAIVYYG 394
            :..:.           :||||.. :.:::..:..::|:|..|.::..|..|.:.|....:|||||
plant   295 VTLAL-----------DDDVENN-NGERNTAVEGSLKDVILSPLMRMRLVISVAISFTVSIVYYG 347

  Fly   395 LSLNATSLSGNKYLNFALVCLVEIPGYSLAWLFLRRFGRRVALSGSLLLCSITCVASGFVTLAQG 459
            ||||..:|..|.|||..:..:.|:|.:::..:.|.::||:....|:.....:.|:. ||.....|
plant   348 LSLNVGNLKTNLYLNVFVNAVSEMPAFAITAVLLDKYGRKPLSIGTQWFSCVFCLV-GFSVWGAG 411

  Fly   460 DW--IPCQTGVESRHSWSCANWLVVTLFLVGKLGITSSFAVIYTFTAEMMPTVIRSGGVGVMSTF 522
            .|  :...:||                  :|..|:..::.:::.:.||:.|||:|:..:|..:..
plant   412 PWKSVRMVSGV------------------LGIFGMAGTYNLLFIYIAELFPTVVRNAALGCATQA 458

  Fly   523 ARFGAMLAPFVPLLASYYDPLPLLLFGTLSLVAGLLSLLLPETFNRKLPDTV 574
            |:.||:|||||.:|.   :.||..:|....||.|.|:..||||.|:.|.||:
plant   459 AQMGAILAPFVVVLG---EELPFGVFAVCGLVGGGLAFYLPETLNKPLYDTM 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 154/558 (28%)
MFS 158..533 CDD:119392 107/383 (28%)
OCT4NP_188702.2 MFS_OCT_plant 90..496 CDD:340936 133/485 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 252 1.000 Inparanoid score I1021
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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