DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4630 and slc22a13b

DIOPT Version :9

Sequence 1:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster
Sequence 2:XP_017209322.1 Gene:slc22a13b / 556601 ZFINID:ZDB-GENE-061013-532 Length:549 Species:Danio rerio


Alignment Length:584 Identity:177/584 - (30%)
Similarity:285/584 - (48%) Gaps:99/584 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VLDFDDILVEIGEFGRFQRRNYLLICLPVLFAAANSLSYVFTAGSPTYRCYVPECDKLVDAEYGA 76
            ::||..||..:||||.||:|..:.:|||.:|.|.:....||||.|..:.|             .:
Zfish     1 MIDFTQILSSVGEFGAFQKRLLVAVCLPNIFTAFHMFGQVFTAISFPHYC-------------NS 52

  Fly    77 NWV-------------SIAVP----GSWSKRGHFTPSTCERFVANGDHLESSSDPWSAWPLDQCF 124
            :|:             ::.||    |.:.....|||  .|..:.:.:|.                
Zfish    53 SWILRQAPNLTEEKQLNLTVPLDSKGQYESCKMFTP--VEMDIEDIEHY---------------- 99

  Fly   125 AENFTTETERCNQFVYGS--SERTIVQQWGLQCPENLWKLAFVGTIHFAGLVVGTALSGYLADRY 187
              ...|.|...:.:||.:  ...|::.::.|.|...::..| ..:|:.|||:||..|.|.:||:|
Zfish   100 --GINTTTSCIDGWVYKAPKDSSTLITEFDLVCENKVYSEA-SQSIYMAGLLVGALLFGPMADKY 161

  Fly   188 GRKHIFLFCIVFMALTGVAQALSWDYISFLFFALLNAVGT--SGVYPLAFIIGVEMVGPRKREMS 250
            ||:...|..:....|:||..|.|.:.  :::.||...|||  ||:....|::|.|..|..||.:.
Zfish   162 GRRFATLLSLFLQFLSGVGVAFSPNI--YVYIALRFVVGTTISGISINTFVLGTEWCGSAKRALF 224

  Fly   251 SIVLNYFYAVGEALL-GLSVFLPDWRQLQLALSVPPLICVAYFWLVPESVRWLLARNRREQAGVI 314
            :|:.:.|:|:|..|| |::..:.:||.|||.||.|..:...|:|::|||.||||.:.:.:.|...
Zfish   225 TILSHCFFAIGLMLLSGVAYGIRNWRVLQLVLSAPVGLFFIYYWILPESARWLLTQGKLDSAKRE 289

  Fly   315 IRRAAKVNRRDISVELMASFKQQELDAETGQEDDVEGGLHVKKDDKIWLAVKEVARSHILMGRYA 379
            |.:||::|.|.:|..|:               |.:|.....|....|     ::.|...|..|..
Zfish   290 ILKAARINGRKVSENLL---------------DKMEAENTAKSSTMI-----DLFRVGYLRKRAL 334

  Fly   380 ILLLIWAVNAIVYYGLSLNATSLSGNKYLNFALVCLVEIPGYSLAWLFLRRFGRRVALSGSLLLC 444
            |:..:|.|.::||||:|||..:...:.||...:..:.|.|.....:..::|||||:..|..|||.
Zfish   335 IMCYMWFVTSLVYYGVSLNVGNFGLDIYLTQLIFGMAEFPARLSCFPLIQRFGRRICQSVVLLLG 399

  Fly   445 SITCVASGFVTLAQGDWIPCQTGVESRHSWSCANWLVVTLF-LVGKLGITSSFAVIYTFTAEMMP 508
            ...|:.           ||   .:.:::.      :|||:. ::||..:.:||:::|.:|||:.|
Zfish   400 GTACLI-----------IP---AIPAKYP------IVVTVIAVIGKFSLAASFSIVYVYTAELYP 444

  Fly   509 TVIRSGGVGVMSTFARFGAMLAPFVPLLASYYDPLPLLLFGTLSLVAGLLSLLLPETFNRKLPD 572
            ||:|..|||:.|..||...:|||.:.||..|:..:|::::|:|..|.|.|:.|||||.|..|.|
Zfish   445 TVVRQNGVGLNSMCARVAGILAPLIGLLDVYHHAIPMIIYGSLPFVGGALTFLLPETLNTDLQD 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 173/573 (30%)
MFS 158..533 CDD:119392 122/378 (32%)
slc22a13bXP_017209322.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.930

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